Gene SeHA_C0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0954 
Symbol 
ID6491080 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp941836 
End bp944058 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content55% 
IMG OID642741202 
Producthypothetical protein 
Protein accessionYP_002044855 
Protein GI194449469 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGA CCCTGTTCAT CCTTTTTTGT CTACTGGGCG CGCCTGCCCA TGCGGTCGCC 
ATACCCGGCG TGACCACGGG GACATCAACC AGCCAGCAAG CAGCGCCAGA GCCCAGTTCT
GAACAAAAAA AAGCGGCCTA TGCGGCCCTG GCTGACGTAC TGGAGAACGA GGCTTCACGT
AACGAATTGA TAGCGCAACT CCGCGAAGCC TCAACCACGC CGCCGACCGA GCCGGCGCCA
GCGCTTGTGC CGCCTGCGGC CAAAGATGAG AAAACGGTAC TGGAGAACGT CACCACCGTT
ACCCGTCAGT ACGGCGATGC TTTCGCTACC CGTTTCGCCC AGCTTTATCG CAACATCACC
GATGCGCCGC ACAAGCCATT TAACTCGCAA ACCTTCACCA ACGCGTTAAC CCACTTTTTA
TTTCTGGCCG CCGCGGTATT TGGTTTTTAT AGCGTGATAC GGCTTTGCGC CCTGCCGTTA
TATCGAAAAA TGGGCCTGTG GGCGCGCAAG AAAAACCGTG AACGCAGCAA CTGGTTACAG
CTCCCGGCGA TGATCGCCGG CGCGTTTATT ATCGACCTGC TGCTACTGGC GCTCACCTTA
TTTATCGGTC AGATGCTCAG TGATAATTTC CATGCCGGAA GTCGAACTAT CGCTTTTCAG
CAAAGCCTGT TCCTGAATGC CTTCGCGCTG ATAGAGTTCT TTAAAGCGAT TCTGCGGCTT
ATTTTTTGCC CTAATGTACC GGAATTACGC CCATTCGCGA TTCAGGATGC GACAGCGCGT
TACTGGAATC GCCGTATGAG TTCCCTTAGC AGTTTGATTG GCTACGGGCT AATTGTTGCC
GTTCCGATTA TTTCCAACCA GGTGAATGTT CAGGTTGGCG CGATGGCGAA CGTGGCGATC
ATGCTCTGCA TCACCATCTG GGCGCTGTAC CTGATCTTTA AAAACAAAGC GGAGATTACG
CAACATTTAT TAAGCCTGGC GGAACGATCA TTAGCCTTTT TTAGCCTGTT TATCCGCGCC
TTTGCGCTGG TGTGGCACTG GCTGGCCAGC GCTTACTTTA TCGTGCTGTT TTTCTTCTCG
TTATTCGACC CAGGCAATAG CCTGAAGTTT ATGATGGGCG CGACTGTGCG CAGTCTGGCG
ATTATTGGCA TCGCGGCGTT TATCTCCGGT ATGTTTACCC GCTGGATAGC GAAAACCATC
ACCCTGTCGC CCCATACGCA GCGCAATTAC CCGGAATTAC AAAAGCGGCT TAACGGCTGG
CTCTCCTCGG CGCTAAAAGT CGCACGCTTT TTGACCGTCT GCGTCGCCGT TATGCTGTTG
CTCAACGCCT GGGGATTATT CGATTTCTGG CACTGGCTAC ATTATGGCGC GGGGGAAAAG
ATGGTCGATA TCCTCATCCG TATCGCGTTA ATCTTATTCT TCTCCGCCGT GGGATGGACG
ATTCTCGCCA GTCTGATTGA GAATCGCCTG GCCTCCGATA TTCATGGTCG CCCGCTACCC
AGCGCCCGCA CGCGCACGCT GCTGACGCTG TTCCGCAATG CGCTGGCAGT GATTATCAGT
ACCATAACCA TCATGATCGT GTTATCGGAA ATCGGCGTCA ATATCGCGCC ATTGCTGGCT
GGCGCGGGGG CGTTAGGTCT GGCTATCTCT TTCGGTTCGC AAACCCTGGT GAAAGATATT
ATCACCGGCG TCTTTATTCA GTTTGAAAAC GGGATGAATA CCGGCGACTT AGTCACCATA
GGCCCGCTGA CGGGGACGGT CGAAAGAATG TCGATTCGTT CCGTCGGCGT GCGGCAGGAT
ACCGGGGCAT ACCATATTAT CCCGTGGTCC TCGATCACCA CTTTCGCCAA CTTTGTGCGC
GGTATCGGCT CAGTTGTCGC CAACTATGAC GTGGATCGCC ATGAGGATGC GGATAAAGCG
AATCAGGCGC TGAAAGACGC GGTAACGGCG CTGATGGAGA CGGAGGATAT TCGCGGGCTG
ATTATCGGCG AACCCACGTT CGCCGGTATT GTCGGTTTAA CGAACACGGC GTTTACTTTA
CGCGTATCGT TCACCACCCT ACCGCTCAAG CAGTGGACGG TGCGTTTTGC CCTTGATAGC
CAGGTGAAAA AGCATTTTGA TCTGGCCAAT GTGCGCGCGC CGGTGCAAAC GTACCAGGTT
CTGCCCGCCC CCGCCGGCGG CCCGTCGCCT GATTCACTGC CGCCGCGCGA ACCGACGATT
TAG
 
Protein sequence
MRWTLFILFC LLGAPAHAVA IPGVTTGTST SQQAAPEPSS EQKKAAYAAL ADVLENEASR 
NELIAQLREA STTPPTEPAP ALVPPAAKDE KTVLENVTTV TRQYGDAFAT RFAQLYRNIT
DAPHKPFNSQ TFTNALTHFL FLAAAVFGFY SVIRLCALPL YRKMGLWARK KNRERSNWLQ
LPAMIAGAFI IDLLLLALTL FIGQMLSDNF HAGSRTIAFQ QSLFLNAFAL IEFFKAILRL
IFCPNVPELR PFAIQDATAR YWNRRMSSLS SLIGYGLIVA VPIISNQVNV QVGAMANVAI
MLCITIWALY LIFKNKAEIT QHLLSLAERS LAFFSLFIRA FALVWHWLAS AYFIVLFFFS
LFDPGNSLKF MMGATVRSLA IIGIAAFISG MFTRWIAKTI TLSPHTQRNY PELQKRLNGW
LSSALKVARF LTVCVAVMLL LNAWGLFDFW HWLHYGAGEK MVDILIRIAL ILFFSAVGWT
ILASLIENRL ASDIHGRPLP SARTRTLLTL FRNALAVIIS TITIMIVLSE IGVNIAPLLA
GAGALGLAIS FGSQTLVKDI ITGVFIQFEN GMNTGDLVTI GPLTGTVERM SIRSVGVRQD
TGAYHIIPWS SITTFANFVR GIGSVVANYD VDRHEDADKA NQALKDAVTA LMETEDIRGL
IIGEPTFAGI VGLTNTAFTL RVSFTTLPLK QWTVRFALDS QVKKHFDLAN VRAPVQTYQV
LPAPAGGPSP DSLPPREPTI