Gene SeHA_C0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0946 
Symbol 
ID6488695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp934120 
End bp934794 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content53% 
IMG OID642741194 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_002044847 
Protein GI194448368 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones97 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCC CCACCACGAC CACCAAGGGC GAGCAGGCGA AAAGTCAGCT CATTGCCGCC 
GCGCTGGCGC AGTTTGGCGA GTATGGCCTC CATGCCACCA CGCGCGATAT CGCTGCGCTG 
GCGGGGCAAA ATATTGCCGC CATTACTTAC TATTTCGGCT CAAAAGAGGA TTTATACCTC 
GCCTGCGCCC AGTGGATTGC CGATTTTCTT GGCGAAAAAT TTCGCCCCCA TGCTGAAAAA 
GCGGAACGTC TGTTTAGCCA GCCTGCCCCT GACCGGGACG CCATACGCGA ACTCATTCTG 
CTCGCCTGCA AGAACATGAT TATGCTGCTG ACGCAGGAAG ACACCGTTAA CCTGAGCAAA 
TTTATTTCAC GCGAGCAGCT CTCTCCCACG TCGGCCTATC AATTGGTCCA TGAACAGGTT 
ATCGATCCGT TGCACACCCA TCTGACAAGA TTGGTTGCCG CTTATACCGG CTGCGACGCC 
AATGATACGC GCATGATTTT GCATACCCAT GCCTTACTGG GCGAAGTGCT GGCGTTCCGT 
CTCGGCAAAG AAACTATTCT GTTACGTACC GGCTGGCCGC AGTTTGATGA AGAAAAAGCG 
GAGCTGATTT ACCAGACGGT AACCTGCCAC ATCGATCTTA TTCTGCACGG TTTAACGCAA 
AGGAGTCTGG ACTGA
 
Protein sequence
MNIPTTTTKG EQAKSQLIAA ALAQFGEYGL HATTRDIAAL AGQNIAAITY YFGSKEDLYL 
ACAQWIADFL GEKFRPHAEK AERLFSQPAP DRDAIRELIL LACKNMIMLL TQEDTVNLSK 
FISREQLSPT SAYQLVHEQV IDPLHTHLTR LVAAYTGCDA NDTRMILHTH ALLGEVLAFR 
LGKETILLRT GWPQFDEEKA ELIYQTVTCH IDLILHGLTQ RSLD