Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0858 |
Symbol | sdhB |
ID | 6492347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 848911 |
End bp | 849630 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642741107 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_002044765 |
Protein GI | 194451818 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.0007022 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATGAAAC TCGAATTTTC GATTTATCGT TATAACCCGG ATGTCGATAA CGCTCCGCGT ATGCAGGATT ACACCCTGGA AGGCGAAGAA GGGCGCGACA TGATGCTGCT GGATGCGTTA ATCCAGCTTA AAGAAAAAGA TCCCAGCCTT TCTTTCCGCC GTTCCTGCCG CGAAGGTGTG TGCGGTTCTG ATGGTTTGAA TATGAACGGT AAGAATGGTC TGGCCTGTAT TACCCCTATT TCGGCGCTGA CTCAGCCGGG TAAGAAGATT GTGATTCGCC CGCTGCCCGG TTTGCCGGTG ATCCGCGATT TGGTGGTAGA CATGGGGCAA TTCTACGCAC AATATGAGAA GATTAAGCCT TACTTATTGA ATAATGGGCA AAATCCACCG GCTCGTGAGC ATCTGCAGAT GCCGGAGCAG CGTGAAAAAC TCGATGGGCT GTATGAATGT ATTCTTTGCG CCTGTTGCTC AACATCCTGC CCGTCATTCT GGTGGAACCC GGATAAGTTT ATCGGTCCGG CGGGGCTGCT CGCGGCGTAT CGATTCCTGA TCGATAGTCG TGATACCGAG ACTGACAGTC GTCTGGAAGG GATGAGCGAT GCATTCAGCG TATTCCGCTG TCACAGCATT ATGAACTGCG TCAGTGTATG TCCTAAGGGA CTGAACCCGA CGCGCGCTAT CGGCCATATT AAGTCGATGC TGTTGCAGCG TAGCGCATAA
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Protein sequence | MMKLEFSIYR YNPDVDNAPR MQDYTLEGEE GRDMMLLDAL IQLKEKDPSL SFRRSCREGV CGSDGLNMNG KNGLACITPI SALTQPGKKI VIRPLPGLPV IRDLVVDMGQ FYAQYEKIKP YLLNNGQNPP AREHLQMPEQ REKLDGLYEC ILCACCSTSC PSFWWNPDKF IGPAGLLAAY RFLIDSRDTE TDSRLEGMSD AFSVFRCHSI MNCVSVCPKG LNPTRAIGHI KSMLLQRSA
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