Gene SeHA_C0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0839 
Symbol 
ID6491415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp830049 
End bp830615 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID642741090 
ProductDNA recombinase HbiF 
Protein accessionYP_002044748 
Protein GI194450002 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.000821916 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAAAGAA AATATCTTAC GCAAGAAGAG ATTGAAAAAC TGCTGTCAGC GACCGACAGA 
ATGCCCTTCC CGGAAAGAAA CCGCTGCTTA ATCCTGATGG CGTTTATTCA CGGCTTCCGG 
GCCAGTGAGC TGCTGGGGCT GCGCTTGTCG GATATTGATC TTGCAGGAAG ACAGCTTTAT 
ATCCGGCGCC TCAAAAATGG CTTTTCAACG TGTCACCCCC TCCTTCCCGA TGAGTATAAC 
GTACTGAAAA GCTGGCTCAG GGCCAGGAAG TATCTTGAGA AAGGGGCTGA CGGAGACTGG 
CTGTTCCTGT CGCTACGACG GCATCCGCTC AGCAGGCAAC AATTTTTTTA CATACTTCGT 
GAGGCAGGGC GGTTGGCCGA ATTAACGATA GCGCCACATC CTCATATGCT GCGACATGCC 
TGCGGCTACG CCCTTGCTGA TAAAGGGATT GATACACGAC TCATACAGGA CTATCTGGGG 
CACAGGAATA TCCAGCACAC CGTAAGATAC ACCGCAAGTA ACGCCGGGCG TTTTCATGGA 
ATATGGCGAA AAAAACGTCG AGTATAA
 
Protein sequence
MKRKYLTQEE IEKLLSATDR MPFPERNRCL ILMAFIHGFR ASELLGLRLS DIDLAGRQLY 
IRRLKNGFST CHPLLPDEYN VLKSWLRARK YLEKGADGDW LFLSLRRHPL SRQQFFYILR 
EAGRLAELTI APHPHMLRHA CGYALADKGI DTRLIQDYLG HRNIQHTVRY TASNAGRFHG 
IWRKKRRV