Gene SeHA_C0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0658 
Symbol 
ID6488771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp658123 
End bp658641 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content55% 
IMG OID642740916 
Productputative fimbrial protein 
Protein accessionYP_002044583 
Protein GI194447557 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.506556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones87 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTTC GGCGCGTTTT CATCGCTATT GGTTGTGTTT TGTTCAGCCC GCTGAGTCAG 
GCCAACTCAT CTCTGGGCGA AGTGAATATT GAACTGCGCG GTAACGTGGT GGATTTTACC
TGCGCCGTGG TGGCGGGCGA CAGTAACAAA TCGGTTAACC TCGGCACCTG GCCGACAAAA
CAGCTTCACG CCGCCGGTGA CGCCACGCAA CCGGTAGCCT TTAGCCTAAA ACTTGAAGGC
TGCCCGCCGG GGTCGGCGTC TATAACGTTT TCCGGGACGC CAGCGCCCGG CACGGCATTA
CTGGCGCTTG CCGATACGGC AATGGCGCAA AAACTGGCGA TTGAAATTCG CGATGGCGAT
CAACGTCGAT TGCCACTTGA ACAGGCCAGC AAGGCCGTCG ATATTGACAA CAACGGCAAT
GCTACCCTGA AATTCTATGC GAACTATATC GCCTTAGCCG ATGGCGTGCA GCCCGGACTT
GCTAACGCGG ATGCGACCTT CCTGATCAAT TACAATTAG
 
Protein sequence
MIFRRVFIAI GCVLFSPLSQ ANSSLGEVNI ELRGNVVDFT CAVVAGDSNK SVNLGTWPTK 
QLHAAGDATQ PVAFSLKLEG CPPGSASITF SGTPAPGTAL LALADTAMAQ KLAIEIRDGD
QRRLPLEQAS KAVDIDNNGN ATLKFYANYI ALADGVQPGL ANADATFLIN YN