Gene SeHA_C0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0655 
Symbol 
ID6490567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp653735 
End bp654448 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID642740913 
Productchaperone protein FimC 
Protein accessionYP_002044580 
Protein GI194449091 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAGG TATTTTTTAC CATGCTGAAT AGTATAAAAG TAGGCTTTAT TGTTCTTCTC 
ACGTTATTTA CTTCGCTGAA CGTACAGGCG GCGGGGGGGA TTGCATTAGG CGCCACGCGC
GTTATTTATC CCTCGGCGGC GAAGCAGACT TCTCTGGCAA TCAGTAATAG CGATACTCAA
GAACGTTACC TCGTCAATTC ATGGATCGAA AATAACGCTG GGCAGAAAGA AAAAACGTTT
ATCGTTACGC CGCCTTTATT CGTCAGCGAG CCCAAAAGTG AAAACACGCT GCGTATTATC
TACGCCGGGC AACCGCTACC CGGGGATCGG GAGTCGTTAT TCTGGATGAA CGTGAAAGCC
ATCCCGTCGG TCGATAAAAG TCATATTGAA GGAAAAAACG TTCTGCAACT GGCGATTCTG
TCGCGCATCA AACTGTTCGT GCGTCCGGCG AATTTGCCGC AGACGCCGGA AGACGCGCCG
ACCTTGCTGA AATTTTCCCG TGTCGGCAAC CATCTCAAGA TAACCAACCC ATCTGCTTAT
TACCTCACGC TGGTCAATAT CAGCGTGGGC GCGAAAAAGA TTGATAACGT GATGATCGCG
CCAAAAAGCG ACATGCAAAT TCCCTTACCG ACTGGCGCGC AGGGCAACGT GACATTTCAG
TCCGTCAATG ATTACGGCGC ATTGACGTCG GCGACAACGG CCAGTCTCGG TTAA
 
Protein sequence
MQKVFFTMLN SIKVGFIVLL TLFTSLNVQA AGGIALGATR VIYPSAAKQT SLAISNSDTQ 
ERYLVNSWIE NNAGQKEKTF IVTPPLFVSE PKSENTLRII YAGQPLPGDR ESLFWMNVKA
IPSVDKSHIE GKNVLQLAIL SRIKLFVRPA NLPQTPEDAP TLLKFSRVGN HLKITNPSAY
YLTLVNISVG AKKIDNVMIA PKSDMQIPLP TGAQGNVTFQ SVNDYGALTS ATTASLG