Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0655 |
Symbol | |
ID | 6490567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 653735 |
End bp | 654448 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642740913 |
Product | chaperone protein FimC |
Protein accession | YP_002044580 |
Protein GI | 194449091 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAGG TATTTTTTAC CATGCTGAAT AGTATAAAAG TAGGCTTTAT TGTTCTTCTC ACGTTATTTA CTTCGCTGAA CGTACAGGCG GCGGGGGGGA TTGCATTAGG CGCCACGCGC GTTATTTATC CCTCGGCGGC GAAGCAGACT TCTCTGGCAA TCAGTAATAG CGATACTCAA GAACGTTACC TCGTCAATTC ATGGATCGAA AATAACGCTG GGCAGAAAGA AAAAACGTTT ATCGTTACGC CGCCTTTATT CGTCAGCGAG CCCAAAAGTG AAAACACGCT GCGTATTATC TACGCCGGGC AACCGCTACC CGGGGATCGG GAGTCGTTAT TCTGGATGAA CGTGAAAGCC ATCCCGTCGG TCGATAAAAG TCATATTGAA GGAAAAAACG TTCTGCAACT GGCGATTCTG TCGCGCATCA AACTGTTCGT GCGTCCGGCG AATTTGCCGC AGACGCCGGA AGACGCGCCG ACCTTGCTGA AATTTTCCCG TGTCGGCAAC CATCTCAAGA TAACCAACCC ATCTGCTTAT TACCTCACGC TGGTCAATAT CAGCGTGGGC GCGAAAAAGA TTGATAACGT GATGATCGCG CCAAAAAGCG ACATGCAAAT TCCCTTACCG ACTGGCGCGC AGGGCAACGT GACATTTCAG TCCGTCAATG ATTACGGCGC ATTGACGTCG GCGACAACGG CCAGTCTCGG TTAA
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Protein sequence | MQKVFFTMLN SIKVGFIVLL TLFTSLNVQA AGGIALGATR VIYPSAAKQT SLAISNSDTQ ERYLVNSWIE NNAGQKEKTF IVTPPLFVSE PKSENTLRII YAGQPLPGDR ESLFWMNVKA IPSVDKSHIE GKNVLQLAIL SRIKLFVRPA NLPQTPEDAP TLLKFSRVGN HLKITNPSAY YLTLVNISVG AKKIDNVMIA PKSDMQIPLP TGAQGNVTFQ SVNDYGALTS ATTASLG
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