Gene SeHA_C0654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0654 
Symbol 
ID6489589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp653218 
End bp653712 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content54% 
IMG OID642740912 
Productfimbrial protein internal segment 
Protein accessionYP_002044579 
Protein GI194448577 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.781355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCCG TTATTGCGCA GCCGGTAATG GTGGAGAGCG GGCGTGTTCA CCTGCGCGGA 
CAACTGGTCA ATGGCGGCTG CGCTGTCGCC ACTGAAAGCC AGGATTTGCG CGTACTGATG
GGACAGTACC GCACGAATGC GTTTACCGGT CCTGGCAGCT TCGCTCCCGT CAGCGTTCCA
TTTTCGTTAC GGTTAATCTC CTGTAGCGCG GAGGTCTGGC GTCATGTCGG CATTGCGTTT
GCCGGCGTTA CGCCTGCGGA AGATCCCCAT GTTTTTCTGG CCAGCGGCGA GGGTATCGGT
AATGCCGGAA TCGGCCTGGC ATTATTTGAT GACCAGCAGC GGCAAATCAT ACCTAACACG
TTACCGCTTC ATTACACGCC CATTTTAACG TCAGAAATGA CTTTGCATTT TACTGCCCGC
TATCGGGCAA TTTCAGAAAA TATGACGCCG GGACGAATTC ATTCAGAAGT GTGGTTTACG
CTGGTTTACC CATGA
 
Protein sequence
MSPVIAQPVM VESGRVHLRG QLVNGGCAVA TESQDLRVLM GQYRTNAFTG PGSFAPVSVP 
FSLRLISCSA EVWRHVGIAF AGVTPAEDPH VFLASGEGIG NAGIGLALFD DQQRQIIPNT
LPLHYTPILT SEMTLHFTAR YRAISENMTP GRIHSEVWFT LVYP