Gene SeHA_C0653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0653 
Symbol 
ID6487820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp652547 
End bp653104 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID642740911 
Producttype-1 fimbrial protein, A chain 
Protein accessionYP_002044578 
Protein GI194450728 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA AATTAATGAC CTCTACTATT GCGAGTCTGA TGTTTGTCGC TGGCGCAGCG 
GTTGCGGCTG ATCCTACTCC GGTGAGCGTG AGTGGCGGTA CTATTCATTT CGAAGGTAAA
CTGGTTAATG CAGCCTGTGC CGTTAGCACT AAATCCGCCG ATCAAACGGT GACGCTGGGT
CAATACCGTA CCGCCAGCTT TACGGCGATT GGTAATACGA CTGCGCAGGT GCCTTTCTCC
ATCGTCCTGA ATGACTGCGA TCCGAAAGTG GCGGCCACCG CTGCCGTGGC TTTCTCTGGT
CAGGCAGATA ACACCAACCC TAATTTGCTG GCTGTCTCCT CTGCGGACAA TAGCACTACC
GCAACCGGCG TCGGGATTGA GATTCTTGAT AACACCTCCT CACCGTTGAA GCCGGACGGC
GCGACCTTCT CGGCGAAGCA GGCGCTGGTT GAAGGCACCA ATACGCTGCG TTTTACCGCA
CGCTATAAGG CAACCGCCGC CGCCGCGACG CCAGGCCAGG CTAATGCCGA CGCCACCTTT
ATCATGAAAT ACGAATAA
 
Protein sequence
MKHKLMTSTI ASLMFVAGAA VAADPTPVSV SGGTIHFEGK LVNAACAVST KSADQTVTLG 
QYRTASFTAI GNTTAQVPFS IVLNDCDPKV AATAAVAFSG QADNTNPNLL AVSSADNSTT
ATGVGIEILD NTSSPLKPDG ATFSAKQALV EGTNTLRFTA RYKATAAAAT PGQANADATF
IMKYE