Gene SeHA_C0622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0622 
Symbol 
ID6491174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand- 
Start bp622098 
End bp623024 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content53% 
IMG OID642740880 
ProductDNA-binding transcriptional activator AllS 
Protein accessionYP_002044547 
Protein GI194447969 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.19493 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGACC CGGAAACACT GCGTACCTTT ATCAGCGTTG CCGAAACGGG GAGTTTCTCC 
AAAGCGGCGG AGCGCCTGTG TAAAACCACG GCAACCATTA GCTACCGCAT CAAACTGCTG 
GAGGAAAATA CCGGCGTAGG GCTGTTCTTT CGCACAACGC GAAGCGTCTC GTTGACGGCG 
GCGGGCTCTC ACCTTCTCTC TCAGGCAAAA GACTGGCTTG CGTGGTTGGA CAGCATGCCT 
GACGAGCTAC GCCAGGTTAA CGACGGCGTA GAGCGTCAGG TCAATATTGT GGTGAATAAC 
CTGCTCTATA GCCCGCAAGC GGTCGCCAGT CTCTTATCGT GGCTTAATGC GCGTTACCCT 
TTCACTCAGT TTCACTTTTC CCGGCAAATT TATATGGGCG TCTGGGATTC GCTCCTGTAT 
GAAGGTTTTT CGCTGGCGAT TGGCGTAACT GGCACCGAGC CGTTGGCTAA TACCTTTATG 
CTCGACCCTT TAGGTTCCGT ACAATGGCGT TTTGTGATGT CTGCGGATCA TCCTTTAGCT 
CACGTCAGCG GGCCTCTAAC AGAAGCGCAG TTGCGCCGTT TCCCGGCAAT TAATATCGAA 
GACAGCGCGC GTACGCTGAC CAAGCGGGTA GCCTGGCGCC TTCCGGGGCA GAAGGAAATT 
ATCGTGCCTG ATATGGAAAC CAAAATCGCC GCTCATCTGG CAGGCGTCGG TATCGGTTTT 
GTCCCGCAGC CGCTCTGTCA AACGCTGATC GACAAAAACG AACTGGTGAG CTGTACCATC 
CCGACGATGC GTCCGCCCTC ACCGTTAAGC CTCGCCTGGC ATAAATTTGG CGGAGGCAAA 
GCGGTAGAAG ACATTGTGAA ATTATTTACC CAACGGCAAC CCGAAATAGC CGGTTTTTTA 
TCCATTTTCA ATACCGTACG CTGTTAA
 
Protein sequence
MFDPETLRTF ISVAETGSFS KAAERLCKTT ATISYRIKLL EENTGVGLFF RTTRSVSLTA 
AGSHLLSQAK DWLAWLDSMP DELRQVNDGV ERQVNIVVNN LLYSPQAVAS LLSWLNARYP 
FTQFHFSRQI YMGVWDSLLY EGFSLAIGVT GTEPLANTFM LDPLGSVQWR FVMSADHPLA 
HVSGPLTEAQ LRRFPAINIE DSARTLTKRV AWRLPGQKEI IVPDMETKIA AHLAGVGIGF 
VPQPLCQTLI DKNELVSCTI PTMRPPSPLS LAWHKFGGGK AVEDIVKLFT QRQPEIAGFL 
SIFNTVRC