Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0621 |
Symbol | ybbB |
ID | 6490593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 620934 |
End bp | 622028 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642740879 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_002044546 |
Protein GI | 194451850 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.545594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA GACAAAAAGC ACAGGACTAT CGCGCGCTCC TCCTTGCCGA TACGCCTTTA ATTGATGTAC GCGCGCCGAT TGAGTTTGAA CAGGGCGCCA TGCCGGGCGC TATCAACCTG CCATTGATGA TGGATGACGA GCGGGCCGCC GTCGGCACCT GCTACAAACG TCAGGGCGCG GATGCGGCGT TAGCGTTGGG GCATCGGCTG GTTTGCGGCG ACATTCGCCA GCAGCGGCTT GAGGCCTGGA AAGCCGCGTA TCAACGTTTC CCCAACGGGT ATCTGTGCTG CGCGCGCGGC GGTCAGCGGT CACATATCGT ACAACGTTGG CTGCAAGAAA CAGGGATTGA CTGCCCGCTT ATTGAAGGCG GCTATAAAGC GCTGCGCCAG ACAGCAATTC AGGCGACCTG GCAACTGGCG CAAAAACCGA TACTTTTAAT TGGCGGCTGT ACGGGCAGCG GCAAAACGCA ACTGGTGCGA CAACAGCCCA ACGGCGTGGA TCTGGAAGGT CTCGCGCGTC ATCGCGGCTC CTCTTTTGGC CGCACGCTGA ACCCCCAGCT CAGCCAGGCC AGTTTTGAAA ACAAACTTGC CGTTGAATTG CTGAAAATTA ACGCGCGTCA GACGCTAAAA AGGTGGGTAC TGGAAGATGA AGGGCGAACG ATCGGCGCCA ACCATCTGCC TGAGTGTTTA CGCGAAAGAA TGGCGCAGGC CCCCATTGCG GTAGTGGAAG ATCCGTTTGC GCTTCGTCTG GAACGACTGC GTGAAGAGTA TTTCATCTGT ATGCATCACG ACTTCACCCA CGCCTACGGC GATGAAGCCG GTTGGCAGGC GTATAGTGAA TATCTTCATC ATGGACTGTT CGCTATTCGC CGCCGTCTGG GGTTGCAACG CTTTGCCGAA CTGACGGACA CGCTGGATAG GGCGCTGGCA GAGCAATTAT CCAGCGGCAG CACCGACGGC CATATGGCAT GGCTGGTTCC GCTACTTAAC GAATATTACG ACCCAATGTA TCGCTATCAA CTGGAGAAAA AAGCCGCGAA TATCGTTTTT CGCGGCCCAT GGCAAGACGT TGCCAACTGG CTAAAAGCGC AATAG
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Protein sequence | MQDRQKAQDY RALLLADTPL IDVRAPIEFE QGAMPGAINL PLMMDDERAA VGTCYKRQGA DAALALGHRL VCGDIRQQRL EAWKAAYQRF PNGYLCCARG GQRSHIVQRW LQETGIDCPL IEGGYKALRQ TAIQATWQLA QKPILLIGGC TGSGKTQLVR QQPNGVDLEG LARHRGSSFG RTLNPQLSQA SFENKLAVEL LKINARQTLK RWVLEDEGRT IGANHLPECL RERMAQAPIA VVEDPFALRL ERLREEYFIC MHHDFTHAYG DEAGWQAYSE YLHHGLFAIR RRLGLQRFAE LTDTLDRALA EQLSSGSTDG HMAWLVPLLN EYYDPMYRYQ LEKKAANIVF RGPWQDVANW LKAQ
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