Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0613 |
Symbol | |
ID | 6492296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 612177 |
End bp | 612947 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642740871 |
Product | short chain dehydrogenase |
Protein accession | YP_002044538 |
Protein GI | 194451124 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.473252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAAAT CGGTCTTAAT AACAGGATGT TCCAGCGGAA TCGGTCTGGA CAGCGCGCTT GAGCTTAAAC GCCAGGGCTT TCAAATCCTG GCGGGCTGCC GCAAACCTGA TGATGTCGCC CGGATGAACA GTATGGGATT TACCGGCGTG TTGATCGATC TCGACTCCCC TGAAAGCGTG GATCGTGCCG CCGATGAAGT GATCGCCCTG ACCGATAATC GTCTGTATGG GATCTTTAAC AATGCCGGCT ACGGCGTGTA TGGCCCCCTT TCCACCATCA GCCGTGAGCA GATGGAGCAA CAGTTTTCCA GTAATTTCTT CGGCGCGCAT CAGCTTACTA TGCGCTTACT TCCCGCCATG TTGCCGCATG GCGAAGGACG CATTGTGATG ACCTCATCGG TGATGGGGCT GATTTCCACC CCAGGGCGCG GCGCTTACGC CGCCAGCAAA TATGCGCTCG AAGCCTGGTC TGACGCGCTA CGTATGGAGC TACGGCACAC AGGCATTAAA GTGAGCCTGA TAGAACCGGG GCCGATTCGT ACCCGTTTTA CGGATAACGT TAACCAGACG CAGCGTGATA AACCGGTAGA AAATCCCGGC ATCGCCGCAC GTTTCACCCG CGATCCTGAC GCGGTAGTAG CGAAAGTACG TCATGCTTTT GCAAGCGATA AACCCAGGCT GCGCTATCCC GTTACGCTGG TCACCTGGGC GGTGATGGCG CTGAAACGCC TATTGCCGGG CCGGATGCTG GATAAAATTT TACAAAGCTG A
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Protein sequence | MQKSVLITGC SSGIGLDSAL ELKRQGFQIL AGCRKPDDVA RMNSMGFTGV LIDLDSPESV DRAADEVIAL TDNRLYGIFN NAGYGVYGPL STISREQMEQ QFSSNFFGAH QLTMRLLPAM LPHGEGRIVM TSSVMGLIST PGRGAYAASK YALEAWSDAL RMELRHTGIK VSLIEPGPIR TRFTDNVNQT QRDKPVENPG IAARFTRDPD AVVAKVRHAF ASDKPRLRYP VTLVTWAVMA LKRLLPGRML DKILQS
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