Gene SeHA_C0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0553 
Symbollon 
ID6490088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp552664 
End bp555018 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content54% 
IMG OID642740818 
ProductDNA-binding ATP-dependent protease La 
Protein accessionYP_002044485 
Protein GI194450573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00718767 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCTG AGCGTTCTGA ACGCATTGAA ATCCCCGTAT TGCCCTTGCG CGATGTGGTG 
GTTTATCCGC ACATGGTCAT ACCCTTATTT GTAGGGCGGG AAAAATCTAT CCGTTGTCTG
GAAGCGGCTA TGGACCATGA TAAAAAAATC ATGCTGGTCG CCCAGAAGGA AGCATCGACG
GATGAGCCGG GTGTAAACGA TCTTTTCACC GTCGGGACCG TGGCCTCTAT TTTGCAGATG
CTGAAACTGC CTGACGGCAC CGTAAAAGTG CTGGTCGAGG GGTTACAGCG CGCGCGTATT
TCCGCGCTGT CTGACAACGG CGAACATTTC TCCGCGAAGG CGGAGTACCT TGATTCGCCA
GCCATTGATG AGCGTGAACA AGAAGTGCTG GTGCGTACCG CTATCAGCCA GTTCGAAGGC
TACATCAAGC TGAACAAAAA AATTCCGCCG GAAGTGCTGA CGTCACTCAA TAGCATTGAC
GACCCTGCAC GTCTGGCTGA CACCATCGCC GCGCATATGC CGCTGAAACT GGCGGATAAA
CAGTCCGTAC TGGAGATGTC CGACGTTAAC GAACGTCTGG AATATCTGAT GGCGATGATG
GAATCTGAAA TCGATCTGCT GCAGGTTGAG AAACGCATTC GCAACCGCGT GAAAAAGCAG
ATGGAGAAAT CCCAGCGCGA GTACTATCTG AACGAGCAAA TGAAAGCGAT TCAGAAAGAG
CTTGGCGAGA TGGACGACGC GCCGGACGAA AACGAAGCGC TGAAGCGTAA GATCGACGCG
GCGAAAATGC CGAAAGAGGC GAAAGAGAAA GCGGAAGCGG AACTGCAGAA GCTGAAAATG
ATGTCTCCGA TGTCGGCGGA AGCGACCGTG GTGCGCGGCT ACATCGACTG GATGGTGCAG
GTGCCGTGGA ATGCGCGTAG CAAGGTCAAA AAAGACCTGC GTCAGGCGCA GGAAATCCTC
GATACTGACC ATTATGGTCT GGAGCGCGTG AAAGACCGCA TCCTTGAGTA TCTCGCGGTT
CAAAGCCGTG TAAATAAAAT CAAGGGGCCG ATCCTGTGTC TGGTGGGGCC GCCGGGGGTA
GGTAAAACCT CGTTGGGCCA GTCCATCGCT AAAGCAACAG GGCGTAAATA CATCCGTATG
GCGCTGGGCG GCGTGCGTGA TGAAGCGGAA ATCCGCGGTC ATCGCCGGAC TTACATTGGC
TCTATGCCGG GTAAACTGAT CCAAAAAATG GCCAAAGTGG GGGTTAAAAA CCCACTGTTC
CTGCTCGATG AGATCGACAA AATGTCTTCT GACATGCGCG GCGATCCGGC TTCCGCACTG
CTGGAAGTGC TGGATCCGGA GCAGAACGTG GCGTTCAGCG ATCATTACCT GGAAGTGGAT
TACGATCTCA GCGATGTGAT GTTCGTCGCC ACTTCCAACT CCATGAACAT TCCGGCGCCG
CTGCTGGATC GTATGGAAGT GATCCGTCTG TCCGGTTATA CCGAAGACGA GAAGCTGAAT
ATTGCTAAAC GTCACCTGCT GCCGAAGCAG ATCGAGCGTA ACGCGCTGAA GAAAGGCGAA
CTGACGGTCG ACGATAGCGC GATTATCGGT ATTATCCGCT ATTACACGCG TGAAGCGGGC
GTGCGTAGTC TGGAGCGTGA AATCTCCAAA CTGTGCCGCA AAGCGGTTAA ACAACTGTTG
CTCGATAAGT CGTTAAAACA TATCGAAATT AACGGCGATA ATCTGCACGA CTACCTCGGT
GTGCAGCGCT TTGATTATGG CCGCGCGGAT AGCGAAAACC GCGTAGGTCA GGTGACGGGG
CTGGCGTGGA CGGAAGTGGG CGGCGATCTG TTGACCATCG AAACCGCCTG CGTCCCGGGC
AAAGGCAAGT TGACCTACAC CGGCTCGCTC GGTGAAGTGA TGCAGGAATC CATTCAGGCG
GCGCTGACCG TGGTGCGTGC GCGCGCGGAA AAACTGGGTA TTAATCCGGA CTTTTACGAA
AAACGCGATA TCCACGTTCA CGTGCCGGAA GGCGCAACGC CGAAAGACGG TCCAAGCGCC
GGTATCGCGA TGTGTACCGC GCTGGTTTCC TGCCTGACCG GTAATCCGGT GCGCGCAGAT
GTGGCAATGA CCGGTGAGAT CACGCTGCGT GGTCAGGTGT TGCCGATCGG CGGCCTGAAA
GAAAAACTGT TGGCGGCGCA TCGCGGCGGG ATTAAAACGG TCTTAATTCC GTTCGAAAAT
AAACGTGACC TGGAGGAAAT TCCGGACAAC GTGATTGCCG ATCTGGATAT TCATCCTGTG
AAGCGCATTG AGGAAGTTCT GACGCTTGCT CTGCAAAACG AACCGTCTGG AATGCAGGTT
GTAACCGCAA AATAG
 
Protein sequence
MNPERSERIE IPVLPLRDVV VYPHMVIPLF VGREKSIRCL EAAMDHDKKI MLVAQKEAST 
DEPGVNDLFT VGTVASILQM LKLPDGTVKV LVEGLQRARI SALSDNGEHF SAKAEYLDSP
AIDEREQEVL VRTAISQFEG YIKLNKKIPP EVLTSLNSID DPARLADTIA AHMPLKLADK
QSVLEMSDVN ERLEYLMAMM ESEIDLLQVE KRIRNRVKKQ MEKSQREYYL NEQMKAIQKE
LGEMDDAPDE NEALKRKIDA AKMPKEAKEK AEAELQKLKM MSPMSAEATV VRGYIDWMVQ
VPWNARSKVK KDLRQAQEIL DTDHYGLERV KDRILEYLAV QSRVNKIKGP ILCLVGPPGV
GKTSLGQSIA KATGRKYIRM ALGGVRDEAE IRGHRRTYIG SMPGKLIQKM AKVGVKNPLF
LLDEIDKMSS DMRGDPASAL LEVLDPEQNV AFSDHYLEVD YDLSDVMFVA TSNSMNIPAP
LLDRMEVIRL SGYTEDEKLN IAKRHLLPKQ IERNALKKGE LTVDDSAIIG IIRYYTREAG
VRSLEREISK LCRKAVKQLL LDKSLKHIEI NGDNLHDYLG VQRFDYGRAD SENRVGQVTG
LAWTEVGGDL LTIETACVPG KGKLTYTGSL GEVMQESIQA ALTVVRARAE KLGINPDFYE
KRDIHVHVPE GATPKDGPSA GIAMCTALVS CLTGNPVRAD VAMTGEITLR GQVLPIGGLK
EKLLAAHRGG IKTVLIPFEN KRDLEEIPDN VIADLDIHPV KRIEEVLTLA LQNEPSGMQV
VTAK