Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0541 |
Symbol | cyoE |
ID | 6488254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 540477 |
End bp | 541364 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642740807 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_002044474 |
Protein GI | 194451748 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.202479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 80 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTAAGC AATACCTGCA AGTAACGAAA CCAGGCATCA TCTTTGGCAA CCTGATCTCG GTGATCGGGG GATTTCTGCT GGCCTCAAAG GGCAGCATTG ACTATCCCCT GTTCATCTAT ACGCTGGTCG GGGTGTCACT GGTTGTGGCG TCGGGTTGTG TATTTAACAA CTACATCGAC AGGGATATCG ACAGGAAGAT GGAAAGGACC AAGAATCGGG TGCTGGTCAA AGGCCTGATT TCTCCTGGCG TCTCGCTGGT ATACGCCACC CTGCTGGGTA TTGCTGGCTT TATGCTGCTG TGGTTTGGCG CTAATCCTCT GGCCTGCTGG CTGGGGGTGA TGGGCTTCGT GGTCTACGTT GGCGTGTACA GCTTGTACAT GAAGCGTCAC TCCGTCTACG GAACGCTGAT TGGTTCTCTC TCCGGCGCAG CGCCGCCGGT GATTGGCTAC TGCGCCGTAA CGGGCGACTT TGATAGCGGC GCGGCGATCC TGTTGGCTAT TTTCAGCCTC TGGCAGATGC CGCACTCTTA CGCCATCGCC ATTTTCCGCT TTAAGGACTA TCAGGCGGCC AATATCCCGG TTCTGCCGGT GGTAAAAGGA ATCTCAGTCG CTAAAAACCA CATAACGCTG TACATCATTG CGTTTGCCGT TGCAACGCTA ATGCTAACGT TGGGCGGTTA TGCCGGTTAC AAATACCTGG TGGTCGCCGC GGCGGTCAGC GTTTGGTGGC TCGGCATGGC GCTACGCGGT TACAAAGTGG AAGATGATAA GGTCTGGGCG CGTAAGCTGT TCGGCTTCTC TATCATTGCG ATTACTGCGC TGAGTATCAT GATGTCCGTT GATTTTATGG TGCCGAATTC GCAGAATCTG CTGACTTACG TCTGGTAA
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Protein sequence | MFKQYLQVTK PGIIFGNLIS VIGGFLLASK GSIDYPLFIY TLVGVSLVVA SGCVFNNYID RDIDRKMERT KNRVLVKGLI SPGVSLVYAT LLGIAGFMLL WFGANPLACW LGVMGFVVYV GVYSLYMKRH SVYGTLIGSL SGAAPPVIGY CAVTGDFDSG AAILLAIFSL WQMPHSYAIA IFRFKDYQAA NIPVLPVVKG ISVAKNHITL YIIAFAVATL MLTLGGYAGY KYLVVAAAVS VWWLGMALRG YKVEDDKVWA RKLFGFSIIA ITALSIMMSV DFMVPNSQNL LTYVW
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