Gene SeHA_C0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0539 
Symbol 
ID6491256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp537379 
End bp538890 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content43% 
IMG OID642740805 
Producthypothetical protein 
Protein accessionYP_002044472 
Protein GI194448067 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTA AATTCTTATC ATTATGTATT TTAGCGGGTG TTTTATTTGT TAGCCAGGTG 
AATGCTTCAG CGAACAACGG TAAAGATGAT GTAAAATATG CTGCGCTTAC CCAGAAGGAT 
CTTGATGCTT TGCCTGTGGA AAAAAGAGCT TCGGTTCTGG ATGAACTGGG GTTTATCCAT 
GAATACGGTA TTGGTGTACC GATGAATCGC GAACGGGCGT TGCAGTATTA CAAGCAGGCC 
TGTGAACTTG GCGGTAACTA TGGTTGCTAT AATGTGAAGT ATGCTTATCA GTATGGCGAC 
GGAGTGGCGA AAGATAGCGC TCAGGCCAAT AAGTATGCTA AGAAAATGAA TCTGGATAAT 
TTATTGATTG AGCAAGAATA TATTGATAAG TTTTCGCAAG AAATTTACAT GGCAAAAGCA 
TTGGCCGATA CGGATAAATC GCAGCGGGCG GCATTTATTA GTATACTAAT TCATGCTCTA 
AATAATAGAC CCGAGAGCGA TGCGCTTTTT TTTAGCCGTA TTGGATTTAA CCAGGAAAAA 
ACATTTCGGC TGGCTACGTT ATGGTCGCAG GATGGCGACC CGCAAATGGA TTATCAGATG 
GGGCGACTCA CCCTTAATGA CTTTTCCGGT CGCTATGCGG ACGAGCCTTA TCAAGCCAGA 
CCTGCGTCAT TGAAGTGGTT TCGCGCCGCC GCGGAAAAAG GCGTCGTTGA GGCCCAATCT 
CTCTTGGGGA GTATTTATTC GGGGGGAGAG GGCGATGAGT GGGGGATTAA GCCAGACATT 
CAGGAAGCAC AAAAATGGTA TGGACAGGCG GCTAAGCAGG GGGACAGCGA TGCACAGATT 
GCGTTAGGTA AAATCTATTA TTCTGGCGCA ACAGGGCGCA CTGATTACGC TAAAGCGCTG 
GCATTATTTA CGCAGGTTGA AAATGATGGT ACTAATTCGC GCTCAACGAT GCCGTTGAGT 
TGGATGTATT ATAACGGTTT AGGTACTGCA CCTGATTGTG ATAAAGCCTG GTCGTATTAC 
AAGAAAGCAT CTCGATATGT AGGTAAGATG GTTGAGGAAA AAATATTTTT AAGTAAGTGC 
GCAGCGGATA TTCAGAGTCG AAAAAACAAC GCGGATGCTT TACCTAAAGT AACGCTAAAA 
AAAGAGAGTG TTTTCTCTCG CGGGATAACG GCTAAACCGA AAGAATGCGC ACTAATTTTT 
CAGATTGGCA CAGATAAAAT CCGTAACATG GCGAATTTGC ATATTACGCT TGAGCTGAAA 
AATGATGATG GAATGGCAAC TGAGGAAACG TTGATGATTC CGCCATTCGG TTTGAATACT 
CTGGGGATAG ATATGCAAAA TCATGATGTT GATCCTCTCA TTACCACATA CGATCTCCCG 
CTGTATACGC AAGATTTTTG TCACGGGATC GGCGATATCC ATTTTACGCT GAAATCCGCT 
ACGGCAACGA TTAACGGTAA GAATGTCGAT TTACTGAAAG CTGATAGTGT GCGCTTTTTA 
GATAAAGAAT AA
 
Protein sequence
MKIKFLSLCI LAGVLFVSQV NASANNGKDD VKYAALTQKD LDALPVEKRA SVLDELGFIH 
EYGIGVPMNR ERALQYYKQA CELGGNYGCY NVKYAYQYGD GVAKDSAQAN KYAKKMNLDN 
LLIEQEYIDK FSQEIYMAKA LADTDKSQRA AFISILIHAL NNRPESDALF FSRIGFNQEK 
TFRLATLWSQ DGDPQMDYQM GRLTLNDFSG RYADEPYQAR PASLKWFRAA AEKGVVEAQS 
LLGSIYSGGE GDEWGIKPDI QEAQKWYGQA AKQGDSDAQI ALGKIYYSGA TGRTDYAKAL 
ALFTQVENDG TNSRSTMPLS WMYYNGLGTA PDCDKAWSYY KKASRYVGKM VEEKIFLSKC 
AADIQSRKNN ADALPKVTLK KESVFSRGIT AKPKECALIF QIGTDKIRNM ANLHITLELK 
NDDGMATEET LMIPPFGLNT LGIDMQNHDV DPLITTYDLP LYTQDFCHGI GDIHFTLKSA 
TATINGKNVD LLKADSVRFL DKE