| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0525 |
|---|
| Symbol | ispA |
|---|
| ID | 6488149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 523651 |
|---|
| End bp | 524550 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642740791 |
|---|
| Product | geranyltranstransferase |
|---|
| Protein accession | YP_002044458 |
|---|
| Protein GI | 194450485 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTTA CGCAGCAGCT ACAGGCTTGC GTAACGCAAG CGAATCAGGC GCTGAGCCGT
TTTATCGCGC CACTGCCCTT TCAGAACACT CCCGTGGTCG AAGCCATGCA GTATGGCGCA
TTATTAGGCG GTAAACGCCT GCGGCCATTT CTGGTTTACG CCACCGGTCA AATGTTTGGC
GTCAGTACGG CAACGCTGGA TGCGCCAGCT GCGGCGGTCG AATGCATTCA TGCCTATTCG
CTGATCCATG ACGACCTGCC AGCGATGGAC GATGACGATT TGCGTCGCGG CCTGCCGACT
TGCCATATTA AATTTGGCGA AGCCAACGCA ATCCTGGCGG GAGACGCGTT GCAAACGCTG
GCGTTTGCCA TTATCAGCGA CGCGCCGATG CCGGAAGTCA CCGATCGCGA TCGTATCGCG
ATGATCGCCG AACTGGCGAA CGCCAGCGGC ATCGCCGGCA TGTGCGGCGG TCAGGCATTG
GATCTGGCGG CAGAAGGCCA GCGGATCACT CTGGACGCGC TGGAACGCAT TCATCGCCAT
AAGACCGGCG CGCTCATTCG CGCCGCCGTT AGACTTGGCG CATTGAGCGC GGGCGATAAA
GGACGGAATA CTCTGCCGAT ACTTGACCGC TATGCAGAGA GTATCGGCCT TGCCTTCCAG
GTTCAGGATG ACATTCTGGA TGTGGTGGGC GATACTGCAA CGTTAGGTAA ACGTCAGGGC
GCAGACCAGC AGCTTGGCAA AAGTACCTAC CCTGCACTTC TGGGTCTTGA GCAAGCCCGG
AATAAAGCCC GGGACCTGAT AGAGGACGCC CGTCAGTCGT TACATCAGCT GGCCGCGCAA
TCACTGGACA CCTCGGCACT GGAAGCGCTA GCGAACTACA TAATCCAGCG TGATAAATAA
|
|---|
| Protein sequence | MDFTQQLQAC VTQANQALSR FIAPLPFQNT PVVEAMQYGA LLGGKRLRPF LVYATGQMFG
VSTATLDAPA AAVECIHAYS LIHDDLPAMD DDDLRRGLPT CHIKFGEANA ILAGDALQTL
AFAIISDAPM PEVTDRDRIA MIAELANASG IAGMCGGQAL DLAAEGQRIT LDALERIHRH
KTGALIRAAV RLGALSAGDK GRNTLPILDR YAESIGLAFQ VQDDILDVVG DTATLGKRQG
ADQQLGKSTY PALLGLEQAR NKARDLIEDA RQSLHQLAAQ SLDTSALEAL ANYIIQRDK
|
|---|
| |