Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0508 |
Symbol | secF |
ID | 6491114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 511324 |
End bp | 512295 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642740775 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_002044442 |
Protein GI | 194447677 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCACAGG AATACACTGT TGAACAACTA AACCACGGCC GTAAAGTCTA TGACTTTATG CGCTGGGACT TCTGGGCATT CGGCATCTCC GGGCTGTTGC TGATCGCGGC CATTGTCATT ATGGGCGTAC GCGGGTTTAA CTGGGGGCTG GATTTCACCG GTGGCACGGT AATTGAAATC ACGCTGGAAA AACCGGCTGA AATGGACGTG ATGCGCGAAG CGCTGCAAAA AGCGGGCTAT GAAGAGCCGC AGTTGCAGAA CTTTGGCAGC AGTCACGACA TTATGGTGCG TATGCCGCCA ACCGAAGGTG AAACCGGCGG TCAGGTACTG GGTAGCAAAG TGGTGACGAT CATTAATGAA GCCACCAACC AGAACGCGGC CGTGAAGCGT ATTGAATTCG TGGGGCCAAG CGTGGGCGCC GATCTGGCGC AAACCGGCGC CATGGCGCTG CTGGTGGCGT TGATCTCTAT CCTCGTTTAT GTCGGTTTCC GCTTTGAGTG GCGACTGGCG GCAGGGGTGG TCATCGCGCT GGCGCACGAC GTGATCATTA CGCTGGGGAT ACTGTCGCTT TTCCATATCG AGATTGACCT GACCATTGTG GCATCGTTGA TGTCGGTGAT CGGTTACTCG CTGAACGACA GTATCGTGGT CTCCGACCGT ATTCGTGAAA ACTTCCGCAA AATCCGTCGC GGGACGCCTT ACGAAATCTT TAACGTGTCG CTGACCCAGA CGCTACACCG TACGTTGATT ACCTCCGGTA CGACGTTAGT GGTAATTCTG ATGCTGTACC TCTTCGGCGG TCCGGTACTG GAAGGCTTCT CGCTGACGAT GCTGATCGGT GTCTCTATTG GTACGGCATC TTCTATCTAT GTCGCATCGG CGCTGGCGCT GAAACTCGGT ATGAAGCGCG AGCATATGTT GCAGCAGAAA GTCGAAAAAG AAGGGGCGGA TCAGCCGTCC ATTCTGCCGT AA
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Protein sequence | MAQEYTVEQL NHGRKVYDFM RWDFWAFGIS GLLLIAAIVI MGVRGFNWGL DFTGGTVIEI TLEKPAEMDV MREALQKAGY EEPQLQNFGS SHDIMVRMPP TEGETGGQVL GSKVVTIINE ATNQNAAVKR IEFVGPSVGA DLAQTGAMAL LVALISILVY VGFRFEWRLA AGVVIALAHD VIITLGILSL FHIEIDLTIV ASLMSVIGYS LNDSIVVSDR IRENFRKIRR GTPYEIFNVS LTQTLHRTLI TSGTTLVVIL MLYLFGGPVL EGFSLTMLIG VSIGTASSIY VASALALKLG MKREHMLQQK VEKEGADQPS ILP
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