Gene SeHA_C0508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0508 
SymbolsecF 
ID6491114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp511324 
End bp512295 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content55% 
IMG OID642740775 
Productpreprotein translocase subunit SecF 
Protein accessionYP_002044442 
Protein GI194447677 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACAGG AATACACTGT TGAACAACTA AACCACGGCC GTAAAGTCTA TGACTTTATG 
CGCTGGGACT TCTGGGCATT CGGCATCTCC GGGCTGTTGC TGATCGCGGC CATTGTCATT
ATGGGCGTAC GCGGGTTTAA CTGGGGGCTG GATTTCACCG GTGGCACGGT AATTGAAATC
ACGCTGGAAA AACCGGCTGA AATGGACGTG ATGCGCGAAG CGCTGCAAAA AGCGGGCTAT
GAAGAGCCGC AGTTGCAGAA CTTTGGCAGC AGTCACGACA TTATGGTGCG TATGCCGCCA
ACCGAAGGTG AAACCGGCGG TCAGGTACTG GGTAGCAAAG TGGTGACGAT CATTAATGAA
GCCACCAACC AGAACGCGGC CGTGAAGCGT ATTGAATTCG TGGGGCCAAG CGTGGGCGCC
GATCTGGCGC AAACCGGCGC CATGGCGCTG CTGGTGGCGT TGATCTCTAT CCTCGTTTAT
GTCGGTTTCC GCTTTGAGTG GCGACTGGCG GCAGGGGTGG TCATCGCGCT GGCGCACGAC
GTGATCATTA CGCTGGGGAT ACTGTCGCTT TTCCATATCG AGATTGACCT GACCATTGTG
GCATCGTTGA TGTCGGTGAT CGGTTACTCG CTGAACGACA GTATCGTGGT CTCCGACCGT
ATTCGTGAAA ACTTCCGCAA AATCCGTCGC GGGACGCCTT ACGAAATCTT TAACGTGTCG
CTGACCCAGA CGCTACACCG TACGTTGATT ACCTCCGGTA CGACGTTAGT GGTAATTCTG
ATGCTGTACC TCTTCGGCGG TCCGGTACTG GAAGGCTTCT CGCTGACGAT GCTGATCGGT
GTCTCTATTG GTACGGCATC TTCTATCTAT GTCGCATCGG CGCTGGCGCT GAAACTCGGT
ATGAAGCGCG AGCATATGTT GCAGCAGAAA GTCGAAAAAG AAGGGGCGGA TCAGCCGTCC
ATTCTGCCGT AA
 
Protein sequence
MAQEYTVEQL NHGRKVYDFM RWDFWAFGIS GLLLIAAIVI MGVRGFNWGL DFTGGTVIEI 
TLEKPAEMDV MREALQKAGY EEPQLQNFGS SHDIMVRMPP TEGETGGQVL GSKVVTIINE
ATNQNAAVKR IEFVGPSVGA DLAQTGAMAL LVALISILVY VGFRFEWRLA AGVVIALAHD
VIITLGILSL FHIEIDLTIV ASLMSVIGYS LNDSIVVSDR IRENFRKIRR GTPYEIFNVS
LTQTLHRTLI TSGTTLVVIL MLYLFGGPVL EGFSLTMLIG VSIGTASSIY VASALALKLG
MKREHMLQQK VEKEGADQPS ILP