Gene SeHA_C0494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0494 
Symbol 
ID6490446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp496513 
End bp497715 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content57% 
IMG OID642740762 
Productexonuclease subunit SbcD 
Protein accessionYP_002044429 
Protein GI194449539 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID[TIGR00619] exonuclease SbcD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.413766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TCCACACCTC TGACTGGCAT CTGGGACAAA ACTTCTACAG TAAAAGCCGC 
GCCGCGGAGC ATCAGGCTTT TCTGGACTGG CTGCTGGAGA CCGCGCAGGC CCATCAGGTG
GATGCCATTA TTGTCGCTGG CGATATTTTT GATACCGGTT CGCCGCCAAG CTATGCCCGA
GAACTTTATA ACCGTTTCGT CGTTAATTTA CAGCAAACGG GCTGTCATCT GGTGGTGCTG
GCCGGTAATC ATGATTCCGT CGCCACGCTA AACGAGTCGC GCGACATTCT GGCGTTTCTC
AATACAACCG TGATCGCCAG CGCGGGCTAT GCGCCGCGGC TACTTCATCG TCGCGACGGT
TCTCCGGGCG CCGTACTGTG CCCCATTCCC TTTTTGCGCC CGCGCGACAT TATTACCAGT
CAGGCGGGGT TATCCGGCAG CGAGAAACAG CAGCAACTTC TTCATGCGAT TGCCGATTAT
TATCAACAGC AGCATCAGGA AGCGTGCCAG CTACGCGGCG AACGAAAGCT GCCGGTTATC
GCGACGGGAC ATTTAACCAC CGTCGGTGCC AGCAAAAGCG ATGCGGTTCG CGACATTTAT
ATCGGTACGC TGGATGCCTT TCCGGCGCAG CATTTCCCCC CAGCGGATTA TATCGCATTG
GGACACATTC ACCGCGCGCA ATGTGTCGGC GGCACAGAGC ATATCCGCTA TTGCGGCTCG
CCCATCGCCC TCAGCTTTGA TGAGTGCGGC AAAAGCAAAT GCGTGCATCT GGTGACATTC
GACCAGGGGA AATGGCAAAG TACCGAAAGT CTGGCTGTCC CCGTGACTCA ACCGTTGGCG
GTTTTAAAAG GCGACCTGGC GTCAATTACC GAACAGCTTG AGCAATGGCG CGGCGTTGAG
CAATCGCCCC CCGTCTGGCT GGATATTGAA ATCACCACCG ATGATTATCT GCACGATATC
CAACGCAGAA TACAGACGCT AACGGAGTCG CTACCCGTAG AGGTGTTACT GGTGCGCCGT
AGCCGCGAAC AGCGCGAGCG CTCGCTGGCG AACGAGCGGC GGGAAACATT AAGCGAGCTT
AGCGTGGAGG AGGTTTTTGC GCGGCGTCTG GCGCTGGAAG CGTTAGATCA CCCGCAGCGC
GAGCGCCTGA ATCAGCTCTT TTCCAGCACG CTCTACGCGT TGAATGAGGA GCATGAGGCA
TGA
 
Protein sequence
MRILHTSDWH LGQNFYSKSR AAEHQAFLDW LLETAQAHQV DAIIVAGDIF DTGSPPSYAR 
ELYNRFVVNL QQTGCHLVVL AGNHDSVATL NESRDILAFL NTTVIASAGY APRLLHRRDG
SPGAVLCPIP FLRPRDIITS QAGLSGSEKQ QQLLHAIADY YQQQHQEACQ LRGERKLPVI
ATGHLTTVGA SKSDAVRDIY IGTLDAFPAQ HFPPADYIAL GHIHRAQCVG GTEHIRYCGS
PIALSFDECG KSKCVHLVTF DQGKWQSTES LAVPVTQPLA VLKGDLASIT EQLEQWRGVE
QSPPVWLDIE ITTDDYLHDI QRRIQTLTES LPVEVLLVRR SREQRERSLA NERRETLSEL
SVEEVFARRL ALEALDHPQR ERLNQLFSST LYALNEEHEA