Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0478 |
Symbol | |
ID | 6489789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 482732 |
End bp | 483943 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642740746 |
Product | major facilitator superfamily transporter |
Protein accession | YP_002044413 |
Protein GI | 194450714 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATCCT GGAAAGTTAA TCTAATTTCC GTTTGGTTTG GATGTTTTTT TACCGGGCTG GCAATCAGCC AAATCCTGCC ATTCTTACCC CTTTATATTT CCCAGCTTGG CGTCTCTTCC CATGAAGCGT TATCAATGTG GTCCGGGTTA ACGTTTAGCA TCACGTTTCT TATTTCCGCC ATTGTGTCGC CGATGTGGGG CAGTCTCGCC GATCGTAAAG GGCGTAAACT GATGCTATTG CGCGCGTCGC TCGGGATGGC GATAGCTATT CTACTGCAGG CATTTGCGAC CCATGTCTGG CAACTTTTCC TGCTGCGCGG AATCATGGGG TTAACGTCAG GCTATATCCC CAATGCTATG GCGCTGGTAG CCTCTCAGGT ACCACGCGAA CGTAGCGGCT GGGCGCTCAG TACGCTTTCT ACCGCGCAGA TCAGCGGCGT TATCGGCGGG CCGTTAATGG GCGGCTTTGT CGCGGATCAT ATCGGGCTGC GGGCGGTATT TCTGATTACC GCCATGCTGT TGGTGGTGAG CTTTCTGGTC ACGCTATTTT TAATTAAAGA AGGCGTGCGT CCGGTCATCA AGAAAAGCGA ACGCCTGAGC GGTAAAGCCG TTTTTGCGTC GTTACCTTAT CCTGCGCTGG TGATCAGTTT GTTTTTTACC ACGATGGTCA TTCAACTCTG TAATGGTTCC ATCAGTCCAA TCCTGGCGCT GTTTATCAAA TCAATGATGC CGGACAGTAA TAACATCGCC TTTCTTAGCG GGTTAATTGC CTCGGTGCCC GGTATCTCTG CGCTTATCTC CGCGCCTCGC CTGGGAAAAC TTGGCGACAG AATCGGCACG GAAAGAATTC TGATGGCCAC GCTTATCTGC GCAGTGCTGC TTTTCTTCGC GATGTCCTGG GTCACCACGC CGTTCCAGTT GGGGCTGTTA CGTTTCTTGT TAGGCTTTGC CGATGGCGCG ATGTTACCCG CCGTACAAAC GTTATTGGTG AAATACTCCA GCGATCAAAT TACCGGACGT ATTTTTGGCT ACAACCAGTC ATTTATGTAC CTGGGCAACG TGGTTGGGCC GTTGATGGGC GCGACGGTAT CGGCGATGGC CGGTTTCCGC TGGGTTTTTA TCGCTACGGC GGCGATCGTG TTGATCAATA TCGGGCAACT GACCCTGGCG TTACGTCGTC GGCGTAACGC GCAAAAAGCG AAAGGCCAAT AG
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Protein sequence | MESWKVNLIS VWFGCFFTGL AISQILPFLP LYISQLGVSS HEALSMWSGL TFSITFLISA IVSPMWGSLA DRKGRKLMLL RASLGMAIAI LLQAFATHVW QLFLLRGIMG LTSGYIPNAM ALVASQVPRE RSGWALSTLS TAQISGVIGG PLMGGFVADH IGLRAVFLIT AMLLVVSFLV TLFLIKEGVR PVIKKSERLS GKAVFASLPY PALVISLFFT TMVIQLCNGS ISPILALFIK SMMPDSNNIA FLSGLIASVP GISALISAPR LGKLGDRIGT ERILMATLIC AVLLFFAMSW VTTPFQLGLL RFLLGFADGA MLPAVQTLLV KYSSDQITGR IFGYNQSFMY LGNVVGPLMG ATVSAMAGFR WVFIATAAIV LINIGQLTLA LRRRRNAQKA KGQ
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