Gene SeHA_C0477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0477 
Symbol 
ID6489711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp481880 
End bp482563 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content54% 
IMG OID642740745 
Productextensin family protein 
Protein accessionYP_002044412 
Protein GI194448511 
COG category[S] Function unknown 
COG ID[COG3921] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGAGGTA AGGGTTTTCT GATTATTGTG CTGTTGGGCG GCATTGGCGG GCTGGGATAT 
CGTTATCTTC CCTCTTATTA TAATCCTTTT GCTCCGCTAC AACTTGCCGA TCCGCCAGGC 
TGGATCACTA CCTTCAAACT ACAGCGCCTT ACGCCGTCGC AGTGCCGGGA GCTGTTGACG 
GCGGCCAATC AACAGGGATT AATTTCATCA CAACCTGTTG CGGATAGCGC TGGTGAATGT 
CCCTTGTCCC ATGTTGTGCG CGTCAGAGAT TTTGGCCTGG TCAAACTGAG CAGCAGTTTT 
TTAGCCTCCT GCCCGCTGGC GCTGCGCTCC GCGCTGTTTG TCGAACAGCA GGCAAAACCT 
TTAACAGAAA CGTGGATGAA GCGCCGCCTG ACCCGCATCG AACATCTGGG TAGCTATGCC 
TGCCGTAATA TTTATCACCG CCCGGATGCG CGTCGCAGTG AACATGCCAG CGCAGAAGCG 
CTGGATGTCA GCGGGTTTCA GCTATCAGAT GGCCGAAAAA TCACTGTTCT GCGCGGCTGG 
GGGCGTGAGG AGACGGGGCC CTGGTTACGC GCTATGTTAA ACGCCAGTTG CCATTATTAT 
GGCAATGGGC TCGGGCCTGA CTATAACGCT GCTCATGCTA ACCATTTTCA TCTTGGAATG 
CGGGGCTACG GCGTGTGTCG TTAA
 
Protein sequence
MRGKGFLIIV LLGGIGGLGY RYLPSYYNPF APLQLADPPG WITTFKLQRL TPSQCRELLT 
AANQQGLISS QPVADSAGEC PLSHVVRVRD FGLVKLSSSF LASCPLALRS ALFVEQQAKP 
LTETWMKRRL TRIEHLGSYA CRNIYHRPDA RRSEHASAEA LDVSGFQLSD GRKITVLRGW 
GREETGPWLR AMLNASCHYY GNGLGPDYNA AHANHFHLGM RGYGVCR