Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0471 |
Symbol | |
ID | 6491349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 475990 |
End bp | 477147 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642740739 |
Product | beta-lactam binding protein AmpH |
Protein accession | YP_002044406 |
Protein GI | 194448768 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.598882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 0.181498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACGTA GTCTGCTTTT TACTGCCATG CTGTTTGCGG CATCACTTAC TTCTGTCCAG GCGGCTCAGC CGATTGCCGA TCCGGTTTTT GCCTCTGATA TCGTTGATCG TTATGCCGAG CATATCTTTT ATGGTAGCGG CGCCACGGGC ATGGCGCTGG TGGTGATCGA CGGCAATCAA CGCGTGTTTC GTAGTTTCGG TGACACCAGA CCGGGCAATA ATGTTCGTCC ACAGCTTGAT TCGGTCATTC GTATCGCTTC TCTCACCAAG CTCATGACCA GTGAAATGTT GGTAAAATTG CTCGATCAGG GAACGGTAAA ATTAAACGAT CCGCTCAGCA AATATGCGCC TCCCGGCGCG CGTGTCCCGA CGTATCAAGG CACGCCGATT ACGTTGGTCA ACTTAGCGAC CCACACCAGC GCGCTTCCGC GAGAACAGCC CGGCGGCGCG GCGCATCGTC CGGTATTTGT CTGGCCAACC CGCGAACAAC GCTGGAACTG GCTCTCCACA GCAACGTTAA AAGTCGCGCC CGGTTCACAG GCGGCCTATT CCAATCTGGC GTTCGACCTG TTAGCCGACG CGCTGGCGAC CGCCTCCGGC AAACCTTATA CGCAACTGTT TGAAGAAAAG ATTACCCGCC CGCTGGGAAT GAAAGACACC ACGTTTACCC CTTCTCCCGA TCAGTGTAAG CGTCTGATGG TGGCAGAAAA AGGCGCAAGC CCCTGTAATA ATACGCTGGC AGCCATTGGC AGCGGTGGGG TCTATTCTAC GCCAGGAGAT ATGATGCGCT GGATGCAACA GTATCTGTCG TCAGATTTCT ATCACCGTAG CCAACAGGCC GATCGTATGC AAACGTTGAT TTATCAGCGC ACACAGTTAA AGAAAATCAT CGGGATGGAC GTACCGGGTA AAGCCGACGC GCTCGGTCTG GGCTGGGTCT ATATGGCGCC AAAAGACGGA CGTCCTGGCA TTATCCAGAA AACAGGAGGC GGCGGCGGTT TTATTACCTA TATGGCGATG ATCCCGCAAT ATAATATTGG CGCTTTTGTG GTCGTAACCC GTTCCCCCCT CACGCGTTTT ACCAATATGA GCGACGGGAT TAACGATTTG GTTACTGAGC TAAGCGGCAA TAAACCGATT GCTATTCCTG CATCCTGA
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Protein sequence | MKRSLLFTAM LFAASLTSVQ AAQPIADPVF ASDIVDRYAE HIFYGSGATG MALVVIDGNQ RVFRSFGDTR PGNNVRPQLD SVIRIASLTK LMTSEMLVKL LDQGTVKLND PLSKYAPPGA RVPTYQGTPI TLVNLATHTS ALPREQPGGA AHRPVFVWPT REQRWNWLST ATLKVAPGSQ AAYSNLAFDL LADALATASG KPYTQLFEEK ITRPLGMKDT TFTPSPDQCK RLMVAEKGAS PCNNTLAAIG SGGVYSTPGD MMRWMQQYLS SDFYHRSQQA DRMQTLIYQR TQLKKIIGMD VPGKADALGL GWVYMAPKDG RPGIIQKTGG GGGFITYMAM IPQYNIGAFV VVTRSPLTRF TNMSDGINDL VTELSGNKPI AIPAS
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