Gene SeHA_C0471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0471 
Symbol 
ID6491349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp475990 
End bp477147 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content53% 
IMG OID642740739 
Productbeta-lactam binding protein AmpH 
Protein accessionYP_002044406 
Protein GI194448768 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.598882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.181498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACGTA GTCTGCTTTT TACTGCCATG CTGTTTGCGG CATCACTTAC TTCTGTCCAG 
GCGGCTCAGC CGATTGCCGA TCCGGTTTTT GCCTCTGATA TCGTTGATCG TTATGCCGAG
CATATCTTTT ATGGTAGCGG CGCCACGGGC ATGGCGCTGG TGGTGATCGA CGGCAATCAA
CGCGTGTTTC GTAGTTTCGG TGACACCAGA CCGGGCAATA ATGTTCGTCC ACAGCTTGAT
TCGGTCATTC GTATCGCTTC TCTCACCAAG CTCATGACCA GTGAAATGTT GGTAAAATTG
CTCGATCAGG GAACGGTAAA ATTAAACGAT CCGCTCAGCA AATATGCGCC TCCCGGCGCG
CGTGTCCCGA CGTATCAAGG CACGCCGATT ACGTTGGTCA ACTTAGCGAC CCACACCAGC
GCGCTTCCGC GAGAACAGCC CGGCGGCGCG GCGCATCGTC CGGTATTTGT CTGGCCAACC
CGCGAACAAC GCTGGAACTG GCTCTCCACA GCAACGTTAA AAGTCGCGCC CGGTTCACAG
GCGGCCTATT CCAATCTGGC GTTCGACCTG TTAGCCGACG CGCTGGCGAC CGCCTCCGGC
AAACCTTATA CGCAACTGTT TGAAGAAAAG ATTACCCGCC CGCTGGGAAT GAAAGACACC
ACGTTTACCC CTTCTCCCGA TCAGTGTAAG CGTCTGATGG TGGCAGAAAA AGGCGCAAGC
CCCTGTAATA ATACGCTGGC AGCCATTGGC AGCGGTGGGG TCTATTCTAC GCCAGGAGAT
ATGATGCGCT GGATGCAACA GTATCTGTCG TCAGATTTCT ATCACCGTAG CCAACAGGCC
GATCGTATGC AAACGTTGAT TTATCAGCGC ACACAGTTAA AGAAAATCAT CGGGATGGAC
GTACCGGGTA AAGCCGACGC GCTCGGTCTG GGCTGGGTCT ATATGGCGCC AAAAGACGGA
CGTCCTGGCA TTATCCAGAA AACAGGAGGC GGCGGCGGTT TTATTACCTA TATGGCGATG
ATCCCGCAAT ATAATATTGG CGCTTTTGTG GTCGTAACCC GTTCCCCCCT CACGCGTTTT
ACCAATATGA GCGACGGGAT TAACGATTTG GTTACTGAGC TAAGCGGCAA TAAACCGATT
GCTATTCCTG CATCCTGA
 
Protein sequence
MKRSLLFTAM LFAASLTSVQ AAQPIADPVF ASDIVDRYAE HIFYGSGATG MALVVIDGNQ 
RVFRSFGDTR PGNNVRPQLD SVIRIASLTK LMTSEMLVKL LDQGTVKLND PLSKYAPPGA
RVPTYQGTPI TLVNLATHTS ALPREQPGGA AHRPVFVWPT REQRWNWLST ATLKVAPGSQ
AAYSNLAFDL LADALATASG KPYTQLFEEK ITRPLGMKDT TFTPSPDQCK RLMVAEKGAS
PCNNTLAAIG SGGVYSTPGD MMRWMQQYLS SDFYHRSQQA DRMQTLIYQR TQLKKIIGMD
VPGKADALGL GWVYMAPKDG RPGIIQKTGG GGGFITYMAM IPQYNIGAFV VVTRSPLTRF
TNMSDGINDL VTELSGNKPI AIPAS