| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0469 |
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| Symbol | |
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| ID | 6489265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 472630 |
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| End bp | 475236 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642740738 |
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| Product | putative autotransporter/pertactin |
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| Protein accession | YP_002044405 |
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| Protein GI | 194447396 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.043223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGGATG ACACAGCATA TGTTGATCAT GACTGGGATG ATGGCGATAC ATTTACCCTC
AATATCGCTA ACTCCACTAT CGATGATGAT TATGAATATT TCTACTTCAC CGATGATTAT
AATAATGCTG ATGGAAAAGT TACTACGGAA GATTGGCGTA CTTCCGAATT AGCTTCTTTA
GGCACTGCTG TAACGTTGGA TGTCGAAAGT AATATTAATA TCACCAATAA CTCTCGTGTT
GCAGGTATTA CTCTGAGCCA GGGCGATACT TACGACGCAA CATATGCTAC TGGTGGTGAT
AGCGCTTATG TTCATACTTG GGACAACACT ATTGTCGTTG ACAATTCCAC TGTTACATCA
GGGGCTGTGA CTCCGCTTGA GGGTAGCGGT TGGTTTGGTA ACTCTTCAGA GCCAAGCGAT
TATTCTGGCA ACGCTGTTTA TGATACAACG ACAGGAACCT GGTACCATAA TCCGAATGAC
ACTGCTTTAT CGTTCTCAGA TGATCCTGAC TCATACTATT CGATGAAGAA CAACGTTACA
TTCACCAACG GTTCAACGTT GATGGGTGAT GTTGTGTTTA CGAGTAACTT CAACAATGCT
GACGACGCGA ATGCTGATTC CAATGGCGAT GGTGTTATCA GCGCCAGCGA TGGTTTCAGC
CCAATCGGTT ATGACACCAA CAATGATGGC GTAGAAGATA CGAATGGCGG TTGGAGTCAC
GACAACGATA ACGTTGATGA ACTGAACCTC AAACTGGATA ACGGTAGTAA GTGGGTAGGT
GACGCATACT TTAGCTATGA GTATATCGCA CCGGCTGATA TGTACGATCT TGAAGATGGT
ACTAACAGCT TAGAACCAAG TTCTACTGTG GATAAATGGG GCAACGTTGT TGATGACAAG
ACCTTCCAGA GCGGTATCTT CACTGTAGCG CTGGATAACG GTTCTGAATG GGATACGGTA
AACGCTTCTA ACGTCGATAC CCTAACTGTT AATAATGGTT CTCAGGTTAA CGTAGCTGAT
AGTTCTTCTT TAATCGCAGA CACCATCACA TTGACCAATG GTTCAACGAT GAACCTCAGT
TCCTATGGTG AAGTTGATAC CGATCACCTG ACGGTTGATA GTTACAGTAA AGTTGATCTG
ACAAACGAAA CTGCTTATCT GTATGCTAAC ACCATTACCG TATCAAACGG CGGTGAATTC
AGCATCGGTG CTGGTGAATT TGATGCCGAT TCTTTCGGTA CGGATACTCT GGAACTGACC
AACGCTGGTG TATTTAACAT CAACAACAGC GACTATGTGC TGGATGCAGA TTTGGTTAAC
GGCCACACCA ACACAACCGA TACATCAAAT GCTACCTATG GTTACGGTGT CATCGCTATG
ACTTCTGACG GTCATTTGAC CGTGAATGGT AATGGTGATT ATTACAACGG TGATAACACT
GCCGATACTA CTTACAGTGC TAACGGTGAA GCGGATAATA GCTACACGGA CAATGTTGTA
GCGGCTACCG GTAACTATAA AGTGCGCATC GACAACGCTA CTGGTGCGGG TTCTGTTGCG
GATTACAAAG GCAACGAGCT GATTCGTGTC AATGACGTAA ACACCGACGC AACCTTCTCT
GCAGCAAACA AAGCTGACCT GGGTGCTTAC ACCTATCAGG CTAAGCAGGA AGGCAACACT
GTCGTGCTGG AACAGATGGA GCTGACCGAC TACGCTAACA TGGCGCTGAG CATTCCTTCT
GCGAACACCA ATATCTGGAA CCTGGAACAA GACACCGTTG GTACTCGTCT GACCAACGCT
CGTCATGGCC TGGCGGATAA CGGCGGCGCA TGGGTAAGCT ACTTCGGCGG TAACTTCAAC
GGCGACAACG GCACCATTAA CTACGATCAG GATGTTAATG GCATCATGGT CGGTGTTGAT
ACCAAAGTTG ACGGTAACAA CGCTAAGTGG ATCGTTGGTG CGGCAGCAGG CTTCGCGAAA
GGCGATCTGA GCGATCGTAC CGGTCAGGTG GATCAGGACA GCCAGTCTGC CTACATCTAC
TCTTCCGCTC GTTTCGCAAA CAACATCTTT GTTGACGGTA ACTTGAGCTA CTCTCACTTC
AACAACGATT TGTCTGCTAA CATGAGCGAC GGTACTTACG TTGACGGCAA CACCTCTTCT
GACGCCTGGG GCTTCGGCTT GAAACTGGGT TATGATCTGA AGCTGGGTGA TGCAGGCTAC
GTAACGCCTT ACGGCAGCGT ATCCGGTCTG TTCCAGTCTG GCGATGACTA CCAGCTGAGC
AACGACATGA AAGTTGACGG TCAGTCTTAC GACAGCATGC GTTATGAACT CGGTGTAGAT
GCAGGTTATA CCTTCACTTA CAGCGAAGAT CAGGCGTTGA CGCCGTACTT CAAACTGGCT
TACGTTTACG ACGACTCCAA CAACGATGCT GACGTAAACG GCGACTCTAT CGACAACGGC
GTAGAAGGTT CTGCGGTACG TGTTGGTCTG GGTACTCAGT TCAGCTTCAC GAAGAACTTC
AGCGCCTACA CCGATGCTAA CTACCTCGGC GGCGGTGATG TTGATCAAGA CTGGTCTGCA
AACGTTGGTG TTAAATATAC CTGGTAA
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| Protein sequence | MWDDTAYVDH DWDDGDTFTL NIANSTIDDD YEYFYFTDDY NNADGKVTTE DWRTSELASL
GTAVTLDVES NINITNNSRV AGITLSQGDT YDATYATGGD SAYVHTWDNT IVVDNSTVTS
GAVTPLEGSG WFGNSSEPSD YSGNAVYDTT TGTWYHNPND TALSFSDDPD SYYSMKNNVT
FTNGSTLMGD VVFTSNFNNA DDANADSNGD GVISASDGFS PIGYDTNNDG VEDTNGGWSH
DNDNVDELNL KLDNGSKWVG DAYFSYEYIA PADMYDLEDG TNSLEPSSTV DKWGNVVDDK
TFQSGIFTVA LDNGSEWDTV NASNVDTLTV NNGSQVNVAD SSSLIADTIT LTNGSTMNLS
SYGEVDTDHL TVDSYSKVDL TNETAYLYAN TITVSNGGEF SIGAGEFDAD SFGTDTLELT
NAGVFNINNS DYVLDADLVN GHTNTTDTSN ATYGYGVIAM TSDGHLTVNG NGDYYNGDNT
ADTTYSANGE ADNSYTDNVV AATGNYKVRI DNATGAGSVA DYKGNELIRV NDVNTDATFS
AANKADLGAY TYQAKQEGNT VVLEQMELTD YANMALSIPS ANTNIWNLEQ DTVGTRLTNA
RHGLADNGGA WVSYFGGNFN GDNGTINYDQ DVNGIMVGVD TKVDGNNAKW IVGAAAGFAK
GDLSDRTGQV DQDSQSAYIY SSARFANNIF VDGNLSYSHF NNDLSANMSD GTYVDGNTSS
DAWGFGLKLG YDLKLGDAGY VTPYGSVSGL FQSGDDYQLS NDMKVDGQSY DSMRYELGVD
AGYTFTYSED QALTPYFKLA YVYDDSNNDA DVNGDSIDNG VEGSAVRVGL GTQFSFTKNF
SAYTDANYLG GGDVDQDWSA NVGVKYTW
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