| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0464 |
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| Symbol | prpD |
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| ID | 6487724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011083 |
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| Strand | + |
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| Start bp | 467322 |
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| End bp | 468773 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642740733 |
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| Product | 2-methylcitrate dehydratase |
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| Protein accession | YP_002044400 |
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| Protein GI | 194449245 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0004098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00000887617 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCAC ATATTTCGAA CATCCGCCCA GACTTTGACC GTGAAATCGT TGATATCGTT
GATTACGTGA TGAATTACGA GATCACCTCA AAGGTGGCGT ACGACACCGC GCATTATTGC
CTGCTCGACA CGCTTGGCTG TGGTCTGGAA GCGCTGGAAT ACCCGGCCTG TAAAAAATTG
CTTGGGCCGA TCGTGCCAGG CACGGTGGTG CCCAACGGCG CACGCGTGCC GGGCACTCAG
TTCCAGCTCG ATCCGGTACA GGCAGCTTTT AACATTGGCG CGATGATCCG CTGGCTCGAT
TTTAACGATA CCTGGCTTGC CGCCGAGTGG GGCCATCCTT CTGATAACCT GGGCGGTATT
CTGGCGATTG CGGATTGGCT GTCACGCAAC GCCGTCGCCG CCGGCAAAGC GCCGCTGACC
ATGAAACAGG TATTGAGCGG GATGATCAAA GCCCATGAAA TTCAGGGCTG CATCGCGCTG
GAAAACGCCT TCAACCGTGT CGGACTTGAC CATGTGTTGC TGGTCAAAGT GGCCTCGACC
GCGGTGGTCG CTGAAATGCT GGGGCTGACG CGCGATGAGA TCCTCAACGC GGTATCGCTG
GCGTGGGTCG ACGGCCAGTC GTTGCGCACT TATCGTCATG CGCCGAATAC CGGTACGCGC
AAATCCTGGG CGGCGGGCGA TGCGACTTCG CGCGCGGTAC GTCTGGCGCT GATGGCGAAA
ACCGGCGAGA TGGGCTATCC CTCGGCGCTC ACCGCCAAAA CCTGGGGCTT CTACGACGTT
TCATTCAAAG GTGAAACGTT CCGTTTCCAG CGTCCTTACG GCTCCTACGT GATGGAAAAC
GTGCTATTCA AAATTTCTTT CCCGGCAGAA TTCCACTCGC AAACCGCCGT CGAAGCGGCG
ATGACGCTGT ACGAGCAGAT GCAGGCCGCG GGCAAAACGG CAGCGGATAT CGAGAAAGTG
ACCATCCGCA CCCACGAAGC CTGTCTTCGC ATTATCGATA AAAAAGGCCC GCTCAATAAC
CCGGCGGACC GCGATCACTG TATCCAGTAT ATGGTCGCCG TGCCGTTGCT GTTCGGACGG
TTAACCGCGG CGGATTATGA AGACGAGGTG GCGCAGGACA AGCGTATTGA CGCCCTGCGC
GAGAAGATCG TGTGTTATGA GGACCCGGCT TTTACCGCCG ACTATCACGA CCCGGAAAAA
CGTGCTATCG GCAATGCGAT CTCCGTAGAG TTTACTGATG GCTCACGCTT TGACGAGGTT
GTCGTGGAGT ATCCGATTGG TCATGCGCGT CGCCGCGCCG ACGGTATTCC GAAGCTTATC
GAAAAATTTA AAATTAACCT GGCGCGTCAG TTCCCGACTC GCCAGCAGCA ACGCATTCTG
GATGTCTCCC TGGACAGAGC CCGCCTGGAG CAGATGCCGG TTAACGAATA CCTCGATTTA
TATGTCATCT GA
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| Protein sequence | MSAHISNIRP DFDREIVDIV DYVMNYEITS KVAYDTAHYC LLDTLGCGLE ALEYPACKKL
LGPIVPGTVV PNGARVPGTQ FQLDPVQAAF NIGAMIRWLD FNDTWLAAEW GHPSDNLGGI
LAIADWLSRN AVAAGKAPLT MKQVLSGMIK AHEIQGCIAL ENAFNRVGLD HVLLVKVAST
AVVAEMLGLT RDEILNAVSL AWVDGQSLRT YRHAPNTGTR KSWAAGDATS RAVRLALMAK
TGEMGYPSAL TAKTWGFYDV SFKGETFRFQ RPYGSYVMEN VLFKISFPAE FHSQTAVEAA
MTLYEQMQAA GKTAADIEKV TIRTHEACLR IIDKKGPLNN PADRDHCIQY MVAVPLLFGR
LTAADYEDEV AQDKRIDALR EKIVCYEDPA FTADYHDPEK RAIGNAISVE FTDGSRFDEV
VVEYPIGHAR RRADGIPKLI EKFKINLARQ FPTRQQQRIL DVSLDRARLE QMPVNEYLDL
YVI
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