Gene SeHA_C0459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0459 
Symbol 
ID6491037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp461939 
End bp462571 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content54% 
IMG OID642740728 
Productputative transport protein 
Protein accessionYP_002044395 
Protein GI194447428 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0000000000321828 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGCCGT TTCATGCCGT TGTGCTTACC GTCAGTCTGT TTGTGTTAAC CTTTTTTAAT 
CCCGGCGCGA ATCTGTTTGT GGTGGTGCAA ACCAGCCTCG CATCAGGACG CCGGGCGGGA
GTCATCACCG GCCTGGGCGT CGCCACGGGA GACGCCTTTT ATTCCGGGCT GGGGCTTTTC
GGTCTGGCGA CGCTCATTAC GCAATGCGAA GCGGTATTTT CTCTTATCAA AATTGTCGGC
GGCGCCTATT TATTATGGTT CGCCTGGAAC AGTATTCGCC ACCAGGCGAC GCCGCAAATG
AGCACGCTCC AGACGCCGAT TGCCGCCCCG TGGACAATTT TCTTTCGCCG GGGATTAATG
ACCGATTTAT CCAATCCGCA AACCGTACTG TTTTTTATCA GTATTTTTTC CGTAACGCTT
AGCGCAGAAA CGCCCACATG GGCAAGGTTA ATGGCCTGGG CCGGAATTGT GCTGTCATCC
GTTATCTGGC GTATTTTTCT CAGCCAGGCC TTTTCGCTCC CCGCAGTCCG CCGCGCTTAT
GGACGAATAC AGCGCATTGC CAGCCGTGTT ATCGGCGCCA TTATCGGGAT GTTTGCGCTC
AGACTTCTCT ATGAAGGCGT GACGCACCGC TAA
 
Protein sequence
MEPFHAVVLT VSLFVLTFFN PGANLFVVVQ TSLASGRRAG VITGLGVATG DAFYSGLGLF 
GLATLITQCE AVFSLIKIVG GAYLLWFAWN SIRHQATPQM STLQTPIAAP WTIFFRRGLM
TDLSNPQTVL FFISIFSVTL SAETPTWARL MAWAGIVLSS VIWRIFLSQA FSLPAVRRAY
GRIQRIASRV IGAIIGMFAL RLLYEGVTHR