Gene SeHA_C0455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0455 
SymbolcydB 
ID6490300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp457292 
End bp458302 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content55% 
IMG OID642740724 
Productcytochrome D ubiquinol oxidase subunit II 
Protein accessionYP_002044391 
Protein GI194448054 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.458436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00000000000000920194 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCATCG ATCTTCCGGT TATCTGGTTT GCTATTATCG TGTTCGCCAC GCTGATGTAT 
ATCGTAATGG ATGGGTTCGA TCTGGGCGTC GGTATCCTGT TTCCGTTTAT TCGCGATAAA
CACGATCGCG ATGTTATGGT GAACTCGGTC GCGCCGGTAT GGGACGGGAA CGAAACCTGG
CTGGTGCTGG GCGGGGCCGG GCTTTTTGGC GCGTTCCCGT TGGCTTATGC CGTCATCACC
GACGCGCTGA CTATCCCGCT GGTGGTTATG CTGCTTGGTC TTATCTTTCG CGGCGTCGCT
TTTGAATTCC GTTTTAAAGC CACCGAGTCG CATCGCGCGT TCTGGGATAA ATCCTTTATC
GTCGGGTCAA TCCTGGCGAC CTTTGCCCAG GGGGTTGTGG TGGGCGCGGT GGTGAGCGGT
TTTCAGGTGG AAGGGCGAAC CTTTAGCGGT TCGCAGCTTG ACTGGCTGAC GCCGTTTAAT
CTGTTCTGCG GCGTCGGTCT GGTTGTCACC TACGCGCTGC TGGGCGCTAC CTGGCTGATT
ATGAAAAGCG AAGATCCGCT GCATAGCCGG ATGTGCGCGC TGTCGCGCCC GTTGTTGATC
GTCTTGTTGT TGGTGATGGG AGGCGTCAGC GTGTGGACGC CGCTCACCCA CGACGACATC
GCCGGGCGCT GGTTCACGCT GCCCAATTTA TACTACTTCC TGCCGGTGCC TGTGCTGGTG
TTGGCTTTTA GCGTCTGGCT ATGGCGCAGC GTGAAAAAAC CAGAATCCCA TGCGCGTCCA
TTTATTCTCA CGCTAGGGCT GATTTTTCTG GGGTTCAGCG GGTTAGGCAT CAGTATTTGG
CCGAATATTA TTCCACCGGA TATTTCGCTG TATGCCGCCG CCGCGCCGCC GCAAAGTCAA
AGCTTTATGC TGGTTGGGGC GCTGATAATC ATCCCGATTA TTCTGGCTTA TACCTTCTGG
AGCTACTACG TCTTCCGTGG AAAAGTGCGA CATGGAGAGG GATATCACTG A
 
Protein sequence
MTIDLPVIWF AIIVFATLMY IVMDGFDLGV GILFPFIRDK HDRDVMVNSV APVWDGNETW 
LVLGGAGLFG AFPLAYAVIT DALTIPLVVM LLGLIFRGVA FEFRFKATES HRAFWDKSFI
VGSILATFAQ GVVVGAVVSG FQVEGRTFSG SQLDWLTPFN LFCGVGLVVT YALLGATWLI
MKSEDPLHSR MCALSRPLLI VLLLVMGGVS VWTPLTHDDI AGRWFTLPNL YYFLPVPVLV
LAFSVWLWRS VKKPESHARP FILTLGLIFL GFSGLGISIW PNIIPPDISL YAAAAPPQSQ
SFMLVGALII IPIILAYTFW SYYVFRGKVR HGEGYH