Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0436 |
Symbol | |
ID | 6489961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 434261 |
End bp | 435811 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642740705 |
Product | cyclic diguanylate phosphodiesterase |
Protein accession | YP_002044372 |
Protein GI | 194448601 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0237258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0000188077 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGTTTA TTGCCGTTCC ACTGATCGTA ATGATATTGG TGGGGTTACT CGCGGGTATC TTCCAGCTAA AACGAGATAT CGCCGTCAGC GCCAATACGC TGCTGCGGTT TAGCGCGGAT ATATCTGCCG CCTCCTGGCA AGTCGCCAGA AAAGCCGCCA GACTGGCTGA GAGTTCTTGC ACTGACACGC TGAAAGAACT GTCCAGAACG CGGGCCTTCA CTCCTTATGT CCGTGACATT GGGTTTCTGG AAAATGGCGA TATCACTTGC TCCTTTGTCA CCGGAACCGA ACGCTATCAT TTTTCCCGGC TGGCAGGGCT TTCTTTACCT GCTTCTTATC CGGAACGGTG GTTGCGATCT ATCGGTAGTA TGGCCGAAGG ACCCGATCGC CTTGTTGTGG TTTATGTGAA AAAAGTAGCA GCGAATAAAG CGGCCTTCGT CATTGTGGAT TCGCAGTATG TCCAGGAGCT CATGGAGATA TTGGCTGCAG AGAGAGCATC AGCCTTTAGC CTGACATTCG GCGCAGGGGA GGCGATTACC AGCGCTGCGA CGTTGCGCGG TAAGGCGTTT TTAACGCAGC GGTTCACCTC AACCGATCAC ACTATCCAGC TGATGGTGCG AACCCCTTTC TCAACGTTAT CGGCATACTG GTTACAAAAC CTTTTTATTT TTATTCCGCT GTCATTATGT CTTTCTGTAG GGATGATGTT GTTCTACAGG CGCTGGTATT TAAAACGCTT ATCTCTGGCC CGGGAGATTG CCAGGGGAAT AACGCACAAT GAATTTACGG TACATTATCA ACCTGTTTTT AATGTTGAAG ACGGTAGTTG CGGCGGCGTG GAGGCGCTAA TGCGCTGGCC GCAACCGGAT GGCCGTTTTA TAACTCCCGA TATTTTTATT ACCGCCGCAG AAAATGAAGG CATGATTATT CCACTCTCTC GTCATCTGTT CGAACTGATT GCTCATGACG TGATAAACTG GACTGTATCG GATGATTTCT ATATCAGCGT AAATATATCG CCTGCGCATC TTATGGATGA CGGTTTTATA CAAGATATAG AGGCGCTCAG GACTCGTTTG GGAACGATAA CGCTTATGTT GGAGCTCACC GAACGTAGCC TGATTGTAGA ACCTTCACAG GTCGCAGAAA AACTTTCAAC GCTCCGTGAA AAAGGCGTGT TAATAGCGAT TGATGATTTT GGGACCGGCT ATTGCTCCCT CTCCTATCTC CAGCAATTAC CTGTAGACTC TCTTAAAATA GACAGAACGT TTATCGATAC CATTGATACC AGCAGCGATG ATGTTCCTGT CCTGGATACT ATCATCACGC TGAGTCAGCG ACTGGGGCTC AATGTGGTTG CCGAAGGGGT CAGTACCCAG CACCAATTGC GTTACATCTT AAGCCACGGG GTAGGATTCG TTCAGGGATT TCTTTATGCC AGGCCGATGG GGGCTAATGA CTTTATGAGC TGGCTTGGCA AGTCGGCCCA GAGGCAAAAT GGTTTGCTCA AGGGGGAAAA CGAATCTGCG AGTGGCCTGG TGGCTGAATA A
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Protein sequence | MLFIAVPLIV MILVGLLAGI FQLKRDIAVS ANTLLRFSAD ISAASWQVAR KAARLAESSC TDTLKELSRT RAFTPYVRDI GFLENGDITC SFVTGTERYH FSRLAGLSLP ASYPERWLRS IGSMAEGPDR LVVVYVKKVA ANKAAFVIVD SQYVQELMEI LAAERASAFS LTFGAGEAIT SAATLRGKAF LTQRFTSTDH TIQLMVRTPF STLSAYWLQN LFIFIPLSLC LSVGMMLFYR RWYLKRLSLA REIARGITHN EFTVHYQPVF NVEDGSCGGV EALMRWPQPD GRFITPDIFI TAAENEGMII PLSRHLFELI AHDVINWTVS DDFYISVNIS PAHLMDDGFI QDIEALRTRL GTITLMLELT ERSLIVEPSQ VAEKLSTLRE KGVLIAIDDF GTGYCSLSYL QQLPVDSLKI DRTFIDTIDT SSDDVPVLDT IITLSQRLGL NVVAEGVSTQ HQLRYILSHG VGFVQGFLYA RPMGANDFMS WLGKSAQRQN GLLKGENESA SGLVAE
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