Gene SeHA_C0434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0434 
Symbol 
ID6491156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp432730 
End bp433464 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content36% 
IMG OID642740704 
Productputative transmembrane regulator 
Protein accessionYP_002044371 
Protein GI194451843 
COG category[K] Transcription 
COG ID[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.298214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.0000171865 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATGAAA GCATATTTTT ACTTGATAAG CGTGTTGTAT TTGATAGTAC GAAGATGACC 
TTATCGCATG GTAATGAGAT AATCAGAATA TCAGAAGCTG AGACCCATCT GCTTCTTGCT 
TTTTGGCATG GTCTTTACAA AAAAGAAGAT ATTATTCATT TTGTTTGGGA AAATCGTGGA 
GGCTGCGTCT CAGAATCAAG TTACTATAAA CTCATTAATC AAATGAGAAA TGATTTTAGT 
AGCATCGGTC TACAGTCATC TGACATCGTA ACTCGTCCTC GGGTGGGGGT GTCGCTGTCT 
GTTGCCATTG AACCTATAAA AAAAATCACC TCCCTAAAGG TGAGTGATGA AAACGTTAAA 
GGCACCCCGA CTCGGGAGAA CATATTTTAC AAAATTAAAC GTCACAGCGT ATTTGTGGTA 
TTAACAGGAG CCATTCTTCT GGCATTGCTC TATGGTGTAT TTACTATATA TAAAGCGCCT 
GTTCGTAACA GCCCTGATAG TTTTTTTACA TATCTTGGCG AATATAACGA TTATGCAATC 
TATAAAACAA AAGAGGATAA GGTCACATTA AGTGAAGTAG TTTTTGCTTT TAACTCTCTA 
AAAATTAAAA TTTACCGGCA AAATGGACGC CATCTTTATT ATATCAGGGA GCCAAATATG 
AATATTTTTC TGCAATGCTT AAATCCTGTT GAAATGGCGG TGCCAAAATG TATTACAGTA 
AAAGAACGTT ACTGA
 
Protein sequence
MNESIFLLDK RVVFDSTKMT LSHGNEIIRI SEAETHLLLA FWHGLYKKED IIHFVWENRG 
GCVSESSYYK LINQMRNDFS SIGLQSSDIV TRPRVGVSLS VAIEPIKKIT SLKVSDENVK 
GTPTRENIFY KIKRHSVFVV LTGAILLALL YGVFTIYKAP VRNSPDSFFT YLGEYNDYAI 
YKTKEDKVTL SEVVFAFNSL KIKIYRQNGR HLYYIREPNM NIFLQCLNPV EMAVPKCITV 
KERY