Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0433 |
Symbol | |
ID | 6488384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 431530 |
End bp | 432066 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642740703 |
Product | fimbrial protein |
Protein accession | YP_002044370 |
Protein GI | 194451106 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.428443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0000242972 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATGA AAAAGTATTT AGCAATGATC ACAGGCTCAC TTCTTGTCTC CAGCAGCGCG ATGGCTGTTT CTGATAACAC CATCACCTTT CAAGGGGAAG TCTCTGATGA AACATGCTCT GTCGTGATTA ATGGTAATCA GGCTAAACCC GTCGTGTTAT TGCCAACAGT AAGTACTAAA GACTTATCAG AACAAGGGAA AACCGCGGGG CCAATAACGT TTGATATTGG GCTGTCCGGG TGTACCGGCT CTCAGGACAA AACAACAAAA ATTTCCACTG TCTTTGTCGG TAATCAGGTC ACCAGTAACG GTAACCTGGG TAATACTGGC AGCGCAAAAA ATGTTGAAGT CCAATTACTC GACACTTCAG GGGAGCCAAT CAATCTGACC GGCGGCTTTA CTGGCGACGG CGACCTACAG CTGGAACCAA ATGCTTCTGA AGCGAGCGCG ACTTATACCG CGCGGTATTA CTCTACCGGG AAAGCAGAGG CTGGGACAGT CGCTGCCACC CTACAATACG CCGTTTCGTA TAAATAA
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Protein sequence | MSMKKYLAMI TGSLLVSSSA MAVSDNTITF QGEVSDETCS VVINGNQAKP VVLLPTVSTK DLSEQGKTAG PITFDIGLSG CTGSQDKTTK ISTVFVGNQV TSNGNLGNTG SAKNVEVQLL DTSGEPINLT GGFTGDGDLQ LEPNASEASA TYTARYYSTG KAEAGTVAAT LQYAVSYK
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