Gene SeHA_C0432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0432 
Symbol 
ID6491878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp430707 
End bp431510 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content45% 
IMG OID642740702 
Productfimbrial chaperone protein 
Protein accessionYP_002044369 
Protein GI194448277 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.206552 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.0000544991 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAACGCC AGACCATTTT CAATCGCCAG GGAGTTGTTG AGATGAAAAT GGATACCCGA 
CATTCCGCAT TATATTACTT AATAGTTTTT CTATTGCTGG CCCTACCCGC CACAGCATCG
TGGGCGAGCG TTACTATTTT GGGTAGTCGA ATAATTTACC CATCAACAGC CTCCTCCGTA
GATGTGCAGT TAAAAAATAA TGATGCAATA CCTTATATCG TACAAACCTG GTTTGACGAT
GGCGATATGA ATACCAGCCC GGAAAATAGC AGCGCGATGC CGTTTATTGC CACGCCGCCA
GTATTTCGTA TTCAACCCAA AGCAGGCCAG GTGGTACGTG TAATTTATAA CAACACGAAA
AAATTGCCGC AGGATCGTGA GTCAGTATTC TGGTTTAACG TATTACAGGT GCCACCAACG
AATATTGGCA GCGACAGCGG GCAAAATAAA ATGTTGGTGA TGCTGCGCTC AAGAATAAAA
CTTTTCTATC GTCCTGACGG GCTAGGTAAA CCTGATAATC TGGCGAAAAA ACTACAGATT
AAAACGGTAA ATAAGGGTTC CGGAAAAAGC GGTATTGTTA TTGTTAATCC GCAGCCCTGG
TTTGCCTCTT TAAGTAACCT GAATGTAAAA GTGAACGGCG CTTCGTATAA CCTGGATGCT
GACATGATTG CCCCTTTCTC CAGTCAAACC TGGTGGCTGC CGGGCAAACG GTCACTCAAA
TCCTTCTCCG GTACAGTCAC CGTTACTTTG GTTAACGACC TGGGCGCAAG GATAAGCGAG
AGCTACGATG TCCCCCACCA TTAA
 
Protein sequence
MKRQTIFNRQ GVVEMKMDTR HSALYYLIVF LLLALPATAS WASVTILGSR IIYPSTASSV 
DVQLKNNDAI PYIVQTWFDD GDMNTSPENS SAMPFIATPP VFRIQPKAGQ VVRVIYNNTK
KLPQDRESVF WFNVLQVPPT NIGSDSGQNK MLVMLRSRIK LFYRPDGLGK PDNLAKKLQI
KTVNKGSGKS GIVIVNPQPW FASLSNLNVK VNGASYNLDA DMIAPFSSQT WWLPGKRSLK
SFSGTVTVTL VNDLGARISE SYDVPHH