Gene SeHA_C0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0429 
Symbol 
ID6490249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp426108 
End bp426866 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content47% 
IMG OID642740699 
Productfimbrial chaperone protein 
Protein accessionYP_002044366 
Protein GI194448559 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.193885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.000207785 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCAATT ACAGGCAGTG GTTAGTTTTC AGTAAAGTCA TATTAACGCT ACTTGGGTTG 
ACGGGATGGT ATGGCCCGGC ACAAGCCGCC GTTAATATTG ACAGAACCCG AATTATTTTT
GCTTCAGATG ATGTCGCTCA ATCGTTGACA TTATCCAACG ATAATACAAC GCCGATGCTG
TTACAGGTAT GGACCGACGC CGGAAACATT GACGCCTCTC CGGATAACAG CAAAACGCCG
CTGGTGGCGC TGCCGCCGGT ATTTAAAATG CAGCCAGGAG AACTGAGAAC GCTTCGCCTG
CTCCTGAGTT CCCGCCAGCA GCTTGCAACG GACCGGGAGA GTCTCTTCTG GCTAAACATT
TATCAGATAC CGCCAGTCAC CCAGGACATT AAAAACCACC CGCGAAAACT GGTGTTACCG
CTTCGTTTGA GGCTAAAAAT TTTAATTCGC CCGACTGGGC TAAAAGCGCC CACGGAAGCG
GAGGAGAAAA AATTACGCTT TATTGCTAAA GAGAATACTA TACGGATAGT TAACCCCACC
TCGTGGTATA TGAGTTTAAC GTTAACGATG GATAACAAGA AAAGTATCGG CGATATCATG
GTTGCGCCGA AAACAGCACT TGATGTGCCG CTAACACGCT CGCCAACGCC GGGAGCATCG
ATAAATTATG CAGTAATCAA TGATTCCGGG AACTGGCGAC AATATACCGC CATACTGGAA
AAATATATTA GTAAGAGTGA TTTTATTCCT GAGTTTTGA
 
Protein sequence
MRNYRQWLVF SKVILTLLGL TGWYGPAQAA VNIDRTRIIF ASDDVAQSLT LSNDNTTPML 
LQVWTDAGNI DASPDNSKTP LVALPPVFKM QPGELRTLRL LLSSRQQLAT DRESLFWLNI
YQIPPVTQDI KNHPRKLVLP LRLRLKILIR PTGLKAPTEA EEKKLRFIAK ENTIRIVNPT
SWYMSLTLTM DNKKSIGDIM VAPKTALDVP LTRSPTPGAS INYAVINDSG NWRQYTAILE
KYISKSDFIP EF