Gene SeHA_C0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0426 
Symbol 
ID6489252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp423789 
End bp424754 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content49% 
IMG OID642740696 
ProductLysR family transcriptional regulator 
Protein accessionYP_002044363 
Protein GI194448484 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.144523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.000318501 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACGA CACCTGTAGG AAAAAAACAT CGCCAGCCCC TTGAGGGCTG GCCTTCTGTT 
GAAGATCTTT TCGTTTTTGT CACCGTTGCT CGCAACGGTG GATTTGCCCG GGCAGCGCTG 
GAGCTGGGGT TATCTCCCTC CTATATCAGC AAACGTATCG CTATCCTTGA AAAATGTCTC 
AACGCCCGGC TTTTTTTTCG AAATAACAGA GTGATGCGTC TCACACCGGA AGGCGAAAAT 
GCGCTGTGTG GGGCTATGCA GGTCGTCAGT GAAATGGATG GCTTTGTCAG TCGTTTGGAT 
AATCAACGTG GTGTGTTGGC TGGTAATATC ACCATCAACT GCTCATTTGG TTTTGGGCAT 
AAATATGTCG CAGAGGCGCT GTCGTCATTT ATGATCGCCT ATCCTGATAT TACGGTAAAA 
CTCACGCTAA CGGATCGTGA AGTGGATCTG GTGGAAGAGG GGATCGATAT TGAAATTCGC 
GTTGGGGATG ATATCAACGA ATTGTATATC GCACGGCAGT TAGCCACTAA TCGACGGATC 
CTGTGTGCTT CCCCTGAATA CCTCGAACGC CACGGCAAGC CAGAGTCTGT TAGTGCGCTT 
GTGCAGCACG ATTGCCTAAT GATTCAGGAA AAAAACTCGG CATTTGGCAA TTGGATATTA 
ACGGACGGTA AGCAGCAGAC ACATTGCCGA CTAAACGGTT TTCATTCTTC CAACAGCGGC 
AGTGTGGTGC TTATTTGGGC CCTGAAAGGC CATGGCATTA CATTGCGGTC GGAATGGGAT 
GTTGCGCAGT ATATTGAACG AGGTGAGCTG GTTCGCGTGT TGCCTCAGTG GTATCAGGAA 
GCGAATATCT GGGCTGTATA TACCCGGCGT TCATCAAGTT CTGATCGTAT CAAAATCTGC 
ATCGATTTCC TCACGGAGCA TCTTGCACAA TGCTTGCCAG GCGGTAAAGC ACCGGGCGTA 
CTGTGA
 
Protein sequence
MKTTPVGKKH RQPLEGWPSV EDLFVFVTVA RNGGFARAAL ELGLSPSYIS KRIAILEKCL 
NARLFFRNNR VMRLTPEGEN ALCGAMQVVS EMDGFVSRLD NQRGVLAGNI TINCSFGFGH 
KYVAEALSSF MIAYPDITVK LTLTDREVDL VEEGIDIEIR VGDDINELYI ARQLATNRRI 
LCASPEYLER HGKPESVSAL VQHDCLMIQE KNSAFGNWIL TDGKQQTHCR LNGFHSSNSG 
SVVLIWALKG HGITLRSEWD VAQYIERGEL VRVLPQWYQE ANIWAVYTRR SSSSDRIKIC 
IDFLTEHLAQ CLPGGKAPGV L