Gene SeHA_C0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0422 
SymbolleuD 
ID6491068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp421323 
End bp421949 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content52% 
IMG OID642740694 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_002044361 
Protein GI194451170 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.000414914 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATACGT TTAAGCAAAT CAGCGGGCGA ATTGCGCCGA TGCTGGAACC GAATATCGAC 
ACTGATGTGA TTATGCCAAA ACAGTTCCTG AAAGGGATCG ATCGTCAGGG GCTGGATAAA
GGGGTGTTTT TCGATCGTCG CTTTATGGCT GGCGGCCAAC CAAATCCTGA TTTTATTCTG
AACATGCCGG GCTGGCAGAG CGCGACATTC CTGCTGGTTG GCCCCAATTT TGGCTGTGGA
TCGAGTCGTG AACACGCCGT ATGGGGATTA AAACAACTGG GAGTACGGGG GCTGATAGGT
AGCACATTTG CAGGCATTTT CGATGATAAC TGCCAACGCA ACGGGATCCT CACGGTCTCA
TTAGATGAAC CTGCTTTGGC GCGCCTGGCG CAGCTTGCCG CGAGTGCTGA TACCAATTCT
ATCACTGTTT CACTCGATCG CTGCGAAATT ACGACGGCAG AGGAAACGAT CTCCTTTGTG
ATCAGTGAAC TCAAACGGGC GATGCTGGCC GCAGGCGAAG ATGCGATAGC CTGGACATTG
CAATACTTGC CGGAGATTGA AAATTTTGAG GTTGCGCATT ATTCACGGCG GCCGTGGTTA
AAACGCCCTG CATCCCCGCG CGGTTAA
 
Protein sequence
MDTFKQISGR IAPMLEPNID TDVIMPKQFL KGIDRQGLDK GVFFDRRFMA GGQPNPDFIL 
NMPGWQSATF LLVGPNFGCG SSREHAVWGL KQLGVRGLIG STFAGIFDDN CQRNGILTVS
LDEPALARLA QLAASADTNS ITVSLDRCEI TTAEETISFV ISELKRAMLA AGEDAIAWTL
QYLPEIENFE VAHYSRRPWL KRPASPRG