Gene SeHA_C0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0396 
Symbol 
ID6489595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp394535 
End bp395221 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID642740670 
Productgp79 
Protein accessionYP_002044337 
Protein GI194451221 
COG category[S] Function unknown 
COG ID[COG3646] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.839853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000000000000292927 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAATTAG TTGAAATCAA GAAGCTCGAC TTGGTCACTA ACTCCGCTGT AATCGCTACT 
GGCGTCAAAA AGGATCACAA GCCTGTGATT CAGCTCATCA GGAAGTACAA AAGCGACCTC 
GAAGAGTTCG GAAGGGTGGA ATTTGAAATG CGACCCTTTC AAACGGATGG GGGCATGCAG 
AAGCAGGAAA TAGCACTGTT AAACGAACAG CAAACCACGC TGTTGATCAC ATACATGCGA 
AACAATGAAG TTGTGCGTGA ATTCAAAAAG CGCCTGGTAG CTGAATTCTT CACTATGCGT 
AGCGCGCTGG CGAAAAAGAA AATGGATCGC AACTCTGCAC GCCTGGAGTA CAAACCCATG 
ACCGACGCCA TCAAACATGA GCGAGAGGCT CAGGGTAAGC AGATCGCCCC GCATCACTTC 
AGCAACGAAG CTGACCTGAT TAACCGACTG GCGCTGGGCA TGACGGCGGC CAAGTTCCGC 
GTGCATCACG AAATCGGGAA GAAAGAGCCG ATCCGCGATT ACCTGACGCC GGAACAAATT 
CACTGCATCA CCGAGCTACA GCGCGCCAAC ACGGTATTCA TCAGCATGGG GTGGGACTTC 
GAACAACGCA AAGAAGTGCT GAGCGGCATG TTCGAGCGTA ATCATCGTCA GCCCCTTATC 
GAAGAACAGC ACCGCCTGGC GGCCTAA
 
Protein sequence
MQLVEIKKLD LVTNSAVIAT GVKKDHKPVI QLIRKYKSDL EEFGRVEFEM RPFQTDGGMQ 
KQEIALLNEQ QTTLLITYMR NNEVVREFKK RLVAEFFTMR SALAKKKMDR NSARLEYKPM 
TDAIKHEREA QGKQIAPHHF SNEADLINRL ALGMTAAKFR VHHEIGKKEP IRDYLTPEQI 
HCITELQRAN TVFISMGWDF EQRKEVLSGM FERNHRQPLI EEQHRLAA