Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0382 |
Symbol | c2 |
ID | 6487799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 385883 |
End bp | 386533 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642740656 |
Product | P22 repressor protein c2 |
Protein accession | YP_002044323 |
Protein GI | 194451869 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.103014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.000000000000607321 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATACAC AATTGATGGG TGAGCGTATT CGCGCTCGAA GAAAAAAACT CAAGATTAGA CAAGCCGCTC TTGGTAAGAT GGTGGGAGTG TCTAATGTTG CAATATCGCA ATGGGAGCGC TCGGAGACTG AGCCAAATGG GGAGAACCTG TTGGCACTTT CGAAGGCTCT TCAGTGCTCC CCTGACTATT TGCTGAAAGG AGATTTAAGC CAGACAAACG TTGCCTATCA TAGTAGGCAT GAGCCAAGAG GATCATACCC TCTTATCAGT TGGGTAAGCG CAGGGCAATG GATGGAAGCT GTAGAACCTT ATCACAAGCG CGCGATAGAG AACTGGCACG ACACCACTGT AGATTGTTCA GAAGATTCAT TTTGGCTTGA TGTCCAAGGT GACTCTATGA CAGCACCGGC AGGGTTAAGC ATTCCAGAAG GAATGATAAT TCTGGTTGAT CCCGAAGTCG AACCAAGAAA CGGCAAGCTG GTTGTTGCAA AATTAGAAGG TGAAAACGAG GCCACATTCA AAAAATTAGT TATGGATGCA GGCCGAAAGT TTTTAAAACC ATTAAACCCA CAATATCCGA TGATAGAAAT CAACGGAAAC TGCAAAATCA TTGGCGTAGT TGTTGACGCA AAACTCGCAA ATCTTCCATA A
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Protein sequence | MNTQLMGERI RARRKKLKIR QAALGKMVGV SNVAISQWER SETEPNGENL LALSKALQCS PDYLLKGDLS QTNVAYHSRH EPRGSYPLIS WVSAGQWMEA VEPYHKRAIE NWHDTTVDCS EDSFWLDVQG DSMTAPAGLS IPEGMIILVD PEVEPRNGKL VVAKLEGENE ATFKKLVMDA GRKFLKPLNP QYPMIEINGN CKIIGVVVDA KLANLP
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