Gene SeHA_C0318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0318 
Symbol 
ID6490807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp327244 
End bp327735 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content53% 
IMG OID642740595 
Producttype VI secretion lipoprotein, family 
Protein accessionYP_002044263 
Protein GI194450687 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0341521 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTG CACTGCTCCT GCTTTCCGGA TGCGGCAGTA GCGATGCGTT ACCTGACCTC 
GAATCACAGC GACTCGACCT GAGCGTGAAA GCCTCCGATA AGGTGAATCC TGACAATCAG
AAGAAGGCCG CGCCCATTGA GATACGTGTT TATGAACTAA AAAATGACGC CGCTTTCACG
ACAGCTGATT ACTGGTCGCT CCATGACAAC GACAAATCCG TCCTTACCGA CGATTTAGTG
CGTCGCGACA GCTTTATTTT GCGTCCCGGC GAAGAGAAAA AACTGCGTCG CCCGCTGAAT
GCGCAGACCA CGGCAATCGG CGTACTGGCC GGATACCGTA ACCTGGCCAA ATCGGTCTGG
CGGGTAACCT ACAAAATCCC GGAAGCCCCG GAAAAAGCCT GGTACAGCAG CTTCATACCG
GGGAAAGGAA AAGTGCAGTT GGAGGCGGAA CTGGAACAAA GCGCCATTGT AATTACGGAA
CGGGATAAAT GA
 
Protein sequence
MPFALLLLSG CGSSDALPDL ESQRLDLSVK ASDKVNPDNQ KKAAPIEIRV YELKNDAAFT 
TADYWSLHDN DKSVLTDDLV RRDSFILRPG EEKKLRRPLN AQTTAIGVLA GYRNLAKSVW
RVTYKIPEAP EKAWYSSFIP GKGKVQLEAE LEQSAIVITE RDK