Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0311 |
Symbol | |
ID | 6489354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 321700 |
End bp | 322242 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642740588 |
Product | type VI secretion protein, family |
Protein accession | YP_002044256 |
Protein GI | 194450746 |
COG category | [S] Function unknown |
COG ID | [COG3516] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03358] type VI secretion protein, VC_A0107 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 77 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATCA ACAATAGCGC GCAGAAATTC ATCGCGCGCA ACCGCGCGCC GCGCGTGCAG ATTGAATATG ACGTAGAGAT TTACGGTTCC GAGAAAAAAA TCGAGCTGCC GTTCGTGATG GCGGTGCTGG CCGATCTGGC CGGGAAACCG CGTGAAGAAC TGCCGCCGGT GACGGATCGC AAATTCCTCG ATATTGATAT TGATAACTTC AATGAGCGCA TGAAAGCCAT TGCGCCGCGC GTGGCGTTCG CTGTGCCGAA TACGCTGACG GGTGAAGGTC AGTTGATGGT CGATATCACG CTGGAAAATA TGGACGACTT TTCGCCGGCA CAGATTGCCC GCAAGGTGGA CGCCCTGAAC CAGTTACTGG AAGCCCGCAC CCAACTGGCG AACCTCCAGA CCTACATGGA TGGTAAGGCC GGGGCGGAAA ATCTGGTCAA TAAACTGTTG CAGGACCCGA CCCTGCTGAA AACGCTGGCG AATGCGCCGA AACCGGCCGC TACCCAGCAA GGTGTGTCAG CGGATAATGA ATCAGCGGAA TAA
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Protein sequence | MAINNSAQKF IARNRAPRVQ IEYDVEIYGS EKKIELPFVM AVLADLAGKP REELPPVTDR KFLDIDIDNF NERMKAIAPR VAFAVPNTLT GEGQLMVDIT LENMDDFSPA QIARKVDALN QLLEARTQLA NLQTYMDGKA GAENLVNKLL QDPTLLKTLA NAPKPAATQQ GVSADNESAE
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