Gene SeHA_C0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0304 
Symbol 
ID6492506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp312432 
End bp313481 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content62% 
IMG OID642740581 
ProductImpA-related N- family protein 
Protein accessionYP_002044249 
Protein GI194448891 
COG category[S] Function unknown 
COG ID[COG3515] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03363] type VI secretion-associated protein, ImpA family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA CTAAACCGGT AAGCGCGGAA CAACCCTGCG GCCCCGATCC GGAGTACGAC 
CCGGAATACC TGCTGCTGTT CAGTCGCGCC GCCCCCCAGG CGGAGGCGCA ATATGGTGAT
TTTGTCAGTA CGCCGGAAGC CGTGAACTGG CCGGAAATTG AACGTGATGC GCGCCGTCTG
CTCACGCGCA GTAAGGATAT CCGGGTGTTG ATCCTGCTGC TGCGCAGTCG CATCCAGCAG
GCTGGCGCAC AGGGACTGGC GGAAATACTC ACACAACTGG CAGAACTGAG CGTAATCTGG
TCCGATGCAC TCCATCCACA GCTGCTTACC GGCGAAGGCG CATCCGCAGA ATCTATTGAA
GATGCGGCGC TGGCGCGCAG TAATGCCCTG GCGGCGCTGC TGGATCACGA AGGCGTGATG
GCAGACATTC GCGGTATCAC GCTGTCAAAC AGTGCCGTCC TGCGCCTGCA GGTACGGGAT
GTCGAGCGCG CGTTATCCGC CCCTCGCCCG GCTGATGCGC TGGCCCCCGA ATCCGTCCGC
CAGCAACTGG CCGACCTCGA AGCCCGTGGG GCATTACCGC TGGCGGCGTT TCGCGAAGCG
CAGGAAAGCG CAGAACGCCT GCAAGTGTGG GCGCGTGAGA CATTAGGCGA TCTGGCTCCA
GATTTTTCAC GCCTGCGGCA GTTGTTAGCG CTGCTGCCTG ACGTGGTACA GACAACCACA
CCGGAAATCC CTCCGTCGCC AGCGCCAGTG CCAGACCCCG CAGGCACGGT TATGGATAAT
GCCGTTCCGG CACGGGCAGA GGATGTGCCG CCTGTCAACG CGCCACCCGG TATATCCCTC
CCACACAATG CTGAACCGGG GCCAATTCGC GATCGTAATG ATGCGCTGGA GCGCCTGCGG
TGCATTCGTC GCTGGTTTGA GAGCAGTGAA CCCAGTAGCC CGACCATCCC ACTGTTACGC
CAGGCTGAAA GACTGGTGGG AAAACGGTTC TCGGAGGTGA TCAATGAGAT CCCGGTGGAG
TTGCTGGAGA AGTGGGATGC CCTGGAGTGA
 
Protein sequence
MSLTKPVSAE QPCGPDPEYD PEYLLLFSRA APQAEAQYGD FVSTPEAVNW PEIERDARRL 
LTRSKDIRVL ILLLRSRIQQ AGAQGLAEIL TQLAELSVIW SDALHPQLLT GEGASAESIE
DAALARSNAL AALLDHEGVM ADIRGITLSN SAVLRLQVRD VERALSAPRP ADALAPESVR
QQLADLEARG ALPLAAFREA QESAERLQVW ARETLGDLAP DFSRLRQLLA LLPDVVQTTT
PEIPPSPAPV PDPAGTVMDN AVPARAEDVP PVNAPPGISL PHNAEPGPIR DRNDALERLR
CIRRWFESSE PSSPTIPLLR QAERLVGKRF SEVINEIPVE LLEKWDALE