Gene SeHA_C0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0280 
SymbolproS 
ID6492184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp290196 
End bp291914 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content55% 
IMG OID642740558 
Productprolyl-tRNA synthetase 
Protein accessionYP_002044232 
Protein GI194449602 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0442] Prolyl-tRNA synthetase 
TIGRFAM ID[TIGR00409] prolyl-tRNA synthetase, family II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.888152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value0.308702 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACTA GCCAATACCT GCTCTCCACT CTGAAGGAGA CACCTGCCGA CGCCGAGGTT 
ATCAGCCACC AGCTGATGCT GCGCGCCGGG ATGATCCGCA AGCTCGCCTC CGGGTTATAT
ACCTGGCTGC CGACCGGCCT GCGCGTCCTG AAAAAAGTCG AAAACATCGT GCGTGAAGAG
ATGAACAACG CCGGTGCTAT CGAGGTGTCG ATGCCAGTCG TTCAGCCAGC CGACCTGTGG
CAAGAGAGTG GTCGTTGGGA ACAGTACGGT CCGGAACTGC TGCGTTTTGT CGACCGTGGC
GAGCGTCCGT TCGTACTCGG CCCGACCCAC GAAGAAGTTA TCACCGATCT GGTGCGTAAT
GAACTCAGCT CTTATAAGCA GTTGCCGCTG AACTTCTTCC AAATCCAGAC CAAATTCCGT
GATGAAGTGC GTCCGCGCTT TGGCGTGATG CGTTCGCGCG AATTCCTGAT GAAAGATGCT
TACTCTTTCC ACACCTCTCA GGAGTCGTTG CAGGAAACCT ATGACGCCAT GTACGCCGCG
TATAGCCGTA TCTTCAGCCG TATGGGACTG GATTTCCGCG CGGTACAGGC CGATACCGGT
TCTATCGGCG GCAACGCCTC GCATGAATTC CAGGTGCTGG CGCAAAGCGG CGAAGACGAT
ATCGTTTTCT CTGATGTTTC TGATTACGCG GCTAACATTG AACTGGCAGA AGCTATCGCG
CCGCAAACAC CGCGCGCAGC GGCGACGCAG GAAATGACTC TGGTCGATAC GCCAAATGCC
AAAACCATCG CGGAGCTGGT GGAACAATTC AACCTGCCAA TTGAAAAAAC GGTAAAAACG
CTGCTGGTGA AAGCGGTGAA AGACAGCAAG TCTCCGCTGG TGGCTCTGCT GGTTCGCGGC
GATCATGAAC TGAATGAAGT TAAAGCGGAA AAACTGCCGC ACGTTGCCAG CCCGCTGACC
TTCGCTACCG AAGAAGAGAT TCGCGCCGTG ATTAATGCCG GCCCTGGCTC CCTCGGCCCG
GTCAATATGC CGATTCCGGT CATCATCGAT CGCACCGTTG CCGCCATGAG CGATTTTGCC
GCTGGCGCCA ACATCGACGG TAAACACTAC TTTGGTATTA ACTGGGATCG CGATGTGGCG
ACGCCTGTTG TTGCCGACAT CCGTAACGTA GTCGCCGGCG ATCCGAGTCC GGATGGTCAG
GGAACGTTGC TTATCAAACG CGGTATCGAA GTGGGTCACA TCTTCCAGTT AGGTACCAAG
TACTCAGAAG CGCTGAAAGC CTCCGTTCAG GGTGAAGATG GCCGTAACCA GATCCTGACA
ATGGGCTGCT ACGGTATCGG CGTAACACGT GTCGTTGCCG CGGCTATCGA GCAGAACTTT
GACGAGCGCG GCATTGTATG GCCTGACGCC ATTGCGCCTT TCCAGGTCGC TATTCTGCCG
ATGAATATGC ACAAATCCTT CCGTGTGCAG GAGCTGGCGG AAAAGCTGTA CAGCGAATTG
CGCGCGCAGG GCATTGAAGT GCTGATGGAC GACCGTAAAG AGCGCCCGGG CGTGATGTTT
GCCGATATGG AGCTGATTGG TATTCCACAT ACTATCGTGA TTGGCGATCG CAACCTGGAT
AACGACGATA TTGAGTATAA ATACCGTCGT AGCGGTGAAA AATCGCTGAT TAAAACCGGC
GATATCGTTG ATTATCTGGT CAAGGCGATT AAAGGCTAA
 
Protein sequence
MRTSQYLLST LKETPADAEV ISHQLMLRAG MIRKLASGLY TWLPTGLRVL KKVENIVREE 
MNNAGAIEVS MPVVQPADLW QESGRWEQYG PELLRFVDRG ERPFVLGPTH EEVITDLVRN
ELSSYKQLPL NFFQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHTSQESL QETYDAMYAA
YSRIFSRMGL DFRAVQADTG SIGGNASHEF QVLAQSGEDD IVFSDVSDYA ANIELAEAIA
PQTPRAAATQ EMTLVDTPNA KTIAELVEQF NLPIEKTVKT LLVKAVKDSK SPLVALLVRG
DHELNEVKAE KLPHVASPLT FATEEEIRAV INAGPGSLGP VNMPIPVIID RTVAAMSDFA
AGANIDGKHY FGINWDRDVA TPVVADIRNV VAGDPSPDGQ GTLLIKRGIE VGHIFQLGTK
YSEALKASVQ GEDGRNQILT MGCYGIGVTR VVAAAIEQNF DERGIVWPDA IAPFQVAILP
MNMHKSFRVQ ELAEKLYSEL RAQGIEVLMD DRKERPGVMF ADMELIGIPH TIVIGDRNLD
NDDIEYKYRR SGEKSLIKTG DIVDYLVKAI KG