Gene SeHA_C0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0231 
Symbol 
ID6490278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp238397 
End bp238957 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content52% 
IMG OID642740510 
Productputative fimbrial subunit 
Protein accessionYP_002044184 
Protein GI194448274 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.157233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG CAGTAAAAGC TGCGGTTGCT GCCGCACTGG TTATGGGTGT TTCCAGCTTT 
GCCAATGCTG CGGGCAGTAA TACTGGTACG GTGACTTTTA CCGGTACTAT TGAAGATTCA
CCGTGTTCAA TCGTGGTTGG CGACGAACAC CAGACCGTTA ACCTGGGCCA TATCGGTACC
GGTTCTCTGA TGGGCGGTAA AGAATCTTCA AAAGTCGATT TCCATATCGG TCTGGAAAAC
TGCGCATTCA CCACTGAGAA AGAAGCGTCT ACCGTTTTCT CTGCCATCGG TAACGAATCC
AGCGCTAATC CGGGCAGCGT TGCGCTGATG CGTATCGGCG GCGGCGAAAT GGCGGGTTCC
AGCATTGTTA TCGGCAACCA CCTGGGTTCC GCGATCAAAT TGGGCGACGC TTACAGCGAA
AACCTGACGA TGAACGGCAG CGTTGCGGCG GCGAAACAGA CTCTTAACTT CAAAGCCTGG
GTGAAAGGCG ATTCCGCTGC CACCACTATC GATACCGGCG AATTCAGCAG CACCGTAAAC
TTCACGATCA GCTATCTGTA A
 
Protein sequence
MNTAVKAAVA AALVMGVSSF ANAAGSNTGT VTFTGTIEDS PCSIVVGDEH QTVNLGHIGT 
GSLMGGKESS KVDFHIGLEN CAFTTEKEAS TVFSAIGNES SANPGSVALM RIGGGEMAGS
SIVIGNHLGS AIKLGDAYSE NLTMNGSVAA AKQTLNFKAW VKGDSAATTI DTGEFSSTVN
FTISYL