Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0200 |
Symbol | |
ID | 6488359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 208070 |
End bp | 208753 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642740479 |
Product | chaperone protein FimC |
Protein accession | YP_002044153 |
Protein GI | 194448854 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.873819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCAT TGGCTAAAGC AGGGTTGCTT TGTTGCCTGT TGTGCGGTTC GCTGGCGCAT GCCGCAGGGA TAAACATCGG CACAACGCGG GTTATTTTTC ACGGCGATGC CAAAGATACG TCCATATCGA TAAGCAATAA CGACAACGTT CCCTATTTAA TTCAGTCCTG GGCGCAATCG ATCAGCGAAA CCGGGGCGAG CGGCGATGCG CCGTTTATGG TCACCCCGCC GCTTTTTCGC CTTAATGGCG GGCAAAAGAA CGTACTACGA ATTATCCGTA CCGGCGGCAA TTTGCCGGAA GATCGCGAGT CGCTGTACTG GCTGGATATT AAATCGATTC CCAGCAGCAA TCCGGACAAT AAACACAACA CACTCATGCT GGCCGTTAAA GCGGAATTTA AGCTGATTTA CCGGCCAAAA GCGTTAACCC AAAAACCAGA AGAGGTTGCC GATCGATTAA CGTGGTCGCG TCAGGGTCGC ACGCTCACCG TGAAGAACCC CACGCCCTAT TATATGAACT TCGCCACCCT TTCCGTTGGC AGTCAAAAAG TGAAAGCCCC GCGCTATGTG GCGCCTTTCG GCAACGCGCA GTACACGCTG CCTGCCGCCG CCAGCGGCAC GATCGTCTGG TCTATCATCA ACGATTTTGG CGGTACTGGC CCCGAACATA AACAAACGCC TTGA
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Protein sequence | MNSLAKAGLL CCLLCGSLAH AAGINIGTTR VIFHGDAKDT SISISNNDNV PYLIQSWAQS ISETGASGDA PFMVTPPLFR LNGGQKNVLR IIRTGGNLPE DRESLYWLDI KSIPSSNPDN KHNTLMLAVK AEFKLIYRPK ALTQKPEEVA DRLTWSRQGR TLTVKNPTPY YMNFATLSVG SQKVKAPRYV APFGNAQYTL PAAASGTIVW SIINDFGGTG PEHKQTP
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