Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0193 |
Symbol | gcd |
ID | 6487738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 198638 |
End bp | 200881 |
Gene Length | 2244 bp |
Protein Length | 747 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642740472 |
Product | quinoprotein glucose dehydrogenase |
Protein accession | YP_002044146 |
Protein GI | 194449355 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.52734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGTTG TGGCCGGATT GCTATGGCGC AGTAAACGTG CCGCACTGTG GCTGTATGCC GCCCTGCTGC TGGCGACAAT GATTTGGGGC GTGTGGGAAG TCGGGTTCGA CTTCTGGGCG CTCACGCCGC GTAGCGATAT TCTGGTGTTT TTCGGCATCT GGCTAATATT GCCGTTTGTC TGGCATCGGC TGGTGGTTCC TTCCAGCGGC GCAGTGGCGG CGCTGGTCGT GGCGCTGCTG ATTAGCGGCG GCATTCTGAC CTGGGCTGGC TTCAACGACC CGCAGGAGAT CAACGGTACG CTTCGCGCCG ACGCCACGCC CGCCGCAACA AGCTCGTCGA TCGCCGACGA AGACTGGCCG GCCTATGGAC GTAATCAGGA AGGCCAACGC TATTCGCCGC TGAAACAGAT CACTGCGGAT AACGTTCACC AACTGAAAGA AGCGTGGGTC TTCCGCACCG GCGATCTGAA ACAACCCAAC GATCCGGGCG AAATCACCAA CGAAGTGACC CCGATTAAAG TCGGCGATAC GCTTTATCTG TGTACAGCTC ACCAGCGTCT GTTCGCGCTG GACGCCGCCA GCGGTAAAGA GAAGTGGCAT TTTGATCCTC AGTTGAAGAC CGATTCGTCT TTCCAGCATG TGACCTGCCG CGGCGTCTCT TATCATGAGG CCAAAGCGGA TACCGCCTCG CCGGAGGTCA TCGCCGACTG TCCGCGCCGT ATTATCCTCC CGGTCAACGA CGGTCGCCTT TTCGCGGTGA ATGCCGAAAC CGGCAAGCTG TGTGAAACCT TCGCCAACAA AGGCGTCCTG AATCTGCAAA CCAATATGCC GGATACCACG CCGGGACTGT ATGAACCGAC GTCGCCGCCG ATTATCACCG ATAAAACAAT TGTCATTGCC GGTTCGGTCA CGGATAACTT CTCTACCCGC GAAACGTCCG GCGTTATCCG TGGTTTTGAT GTTAATAGCG GTAAACTCAT GTGGGCCTTC GATCCGGGGG CGAAAGATCC GAACGCGATT CCAGCCGATG AGCACGCTTT TACCTTTAAC TCGCCGAACT CCTGGGCGCC TGCCGCCTAT GATGCGAAAC TGGATCTGGT CTATCTGCCG ATGGGCGTGA CCACGCCGGA TATCTGGGGC GGTAACCGCA CGCCGGAGCA GGAACGTTAT GCCAGCTCCA TCCTGGCGCT GAATGCCACC ACCGGGAAAC TGGCCTGGAG TTATCAGACC GTCCATCACG ATCTGTGGGA TATGGACCTG CCGGCACAGC CGACGCTGGC GGATATTACC GTTGACGGTA CTACCGTTCC GGTTATCTAT GCGCCAGCGA AAACCGGTAA TATCTTTGTG CTGGACAGAC GTAATGGCGA GCTGGTCGTG CCCGCCCCGG AAAAACCGGT CCCGCAGGGC GCGGCAAAAG GCGATTACGT CGCCAAAACT CAGCCGTTCT CTGATTTAAC CTTCCGCCCG AAAAAAGATC TCTCCGGCGC GGATATGTGG GGCGCGACCA TGTTCGACCA ACTGGTGTGC CGCGTCATGT TCCACCAGTT GCGCTATGAA GGTATCTTCA CCCCGCCGTC CGAGCAGGGG ACATTGGTAT TCCCTGGCAA CCTGGGGATG TTTGAATGGG GCGGTATTTC CGTCGATCCA GACCGTCAGG TCGCTATCGC TAACCCGATG GCGCTGCCGT TTGTCTCGAA GCTGATCCCA CGCGGCCCGG GTAATCCGAT GGAGCCGCCG AAAGACGCGA AAGGTACTGG TACAGAAGCG GGTATTCAGC CACAGTACGG CGTACCATTC GGCGTCACGC TGAATCCGTT CCTTTCGCCG TTTGGCCTGC CGTGTAAACA ACCGGCCTGG GGCTATATTT CCGCGTTGGA TCTGAAGACC AATGAAATCG TGTGGAAGAA ACGTATAGGG ACGCCGCGCG ACAGTATGCC GTTCCCGATG CCGGTTCCGG TGCCGTTCAA CATGGGGATG CCAATGCTGG GCGGGCCAAT CTCAACCGCC GGTAATGTGC TGTTCATTGC CGCGACCGCC GACAACTACC TGCGCGCTTA TAACATGAGC AACGGGGAAA AACTGTGGCA GGGACGTTTA CCCGCCGGAG GCCAGGCAAC GCCGATGACC TATGAGGTAA ACGGTAAGCA GTACGTGGTC GTTTCTGCCG GAGGCCACGG TTCGTTTGGT ACGAAGATGG GCGACTATAT CGTGGCCTAT GCTTTGCCTG ACGACGCGAA ATAA
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Protein sequence | MLVVAGLLWR SKRAALWLYA ALLLATMIWG VWEVGFDFWA LTPRSDILVF FGIWLILPFV WHRLVVPSSG AVAALVVALL ISGGILTWAG FNDPQEINGT LRADATPAAT SSSIADEDWP AYGRNQEGQR YSPLKQITAD NVHQLKEAWV FRTGDLKQPN DPGEITNEVT PIKVGDTLYL CTAHQRLFAL DAASGKEKWH FDPQLKTDSS FQHVTCRGVS YHEAKADTAS PEVIADCPRR IILPVNDGRL FAVNAETGKL CETFANKGVL NLQTNMPDTT PGLYEPTSPP IITDKTIVIA GSVTDNFSTR ETSGVIRGFD VNSGKLMWAF DPGAKDPNAI PADEHAFTFN SPNSWAPAAY DAKLDLVYLP MGVTTPDIWG GNRTPEQERY ASSILALNAT TGKLAWSYQT VHHDLWDMDL PAQPTLADIT VDGTTVPVIY APAKTGNIFV LDRRNGELVV PAPEKPVPQG AAKGDYVAKT QPFSDLTFRP KKDLSGADMW GATMFDQLVC RVMFHQLRYE GIFTPPSEQG TLVFPGNLGM FEWGGISVDP DRQVAIANPM ALPFVSKLIP RGPGNPMEPP KDAKGTGTEA GIQPQYGVPF GVTLNPFLSP FGLPCKQPAW GYISALDLKT NEIVWKKRIG TPRDSMPFPM PVPVPFNMGM PMLGGPISTA GNVLFIAATA DNYLRAYNMS NGEKLWQGRL PAGGQATPMT YEVNGKQYVV VSAGGHGSFG TKMGDYIVAY ALPDDAK
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