Gene SeHA_C0188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0188 
Symbol 
ID6488728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp193822 
End bp194589 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content55% 
IMG OID642740467 
ProductDeoR family transcriptional regulator 
Protein accessionYP_002044141 
Protein GI194451683 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.333156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAC AACACCGTCT GGATCTCATT GTGGCGTATC TGAAAAACCA TACGCTGGTT 
ACGGTAGAAC AGCTGGTTGA GGCGGTTGAC GCATCGCCAG CCACTATCCG TCGCGATTTG
ATCAAGCTGG ATGAGCAGGG CGTGATCAGC CGTAGTCATG GCGGCGTGGC GCTGCGGCGT
TTTGAACCCG CCCAGCCCAC CACCAATGAA AAACAACTGC GATCGCCTGC TGAAAAACGG
GCGATCGCAC GCGTTGCCGC ATCGCTGGTC AATGCTGGCG ATGCCGTCGT GCTGGATGCC
GGTACGACAA TGATGGAGCT GGCGAAATGC TTAACCCATC TTCCGCTGCG GGTCATCACC
GTCGATCTGC ATATTGCGCT GTTTTTAGCT GAGTTCCGGC AAATTGAAGT GACGATTGTC
GGCGGTCGTA TCGATGACAG CAGTCAGTCC TGTATCGGTG AGCATGGGCG TAAGCTGTTG
CGCAGCGTGT ATCCGAACAT CGCGTTTATG AGCTGTAATT CATGGGGGGT AAAAACGGGC
GTGACGACCC CAACGGAAGA TAAGGCCGGG CTTAAACAGG AGATTATTGC TAATGCGCAG
CGCAAAGTGT TGCTGGCGGA CAGCAGTAAG TATGGCGCGC ATTCGCTCTT TAATGTGGTG
CCGCTTGAGC GCTTTAATGA CGTGATTACC GACGTCAATC TGCCGCCGTC AGCGCAGGTT
GAACTGAAAG GGCGCGCTTT TGCGCTAACG CTGGTGCAGC CGGAGTGA
 
Protein sequence
MKGQHRLDLI VAYLKNHTLV TVEQLVEAVD ASPATIRRDL IKLDEQGVIS RSHGGVALRR 
FEPAQPTTNE KQLRSPAEKR AIARVAASLV NAGDAVVLDA GTTMMELAKC LTHLPLRVIT
VDLHIALFLA EFRQIEVTIV GGRIDDSSQS CIGEHGRKLL RSVYPNIAFM SCNSWGVKTG
VTTPTEDKAG LKQEIIANAQ RKVLLADSSK YGAHSLFNVV PLERFNDVIT DVNLPPSAQV
ELKGRAFALT LVQPE