Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0168 |
Symbol | lpdA |
ID | 6490624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 176207 |
End bp | 177631 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642740450 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_002044124 |
Protein GI | 194451714 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.928694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 88 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACTG AAATCAAAAC TCAGGTCGTG GTACTTGGGG CGGGCCCGGC AGGCTATTCT GCCGCTTTCC GTTGCGCTGA TTTAGGTCTG GAAACCGTAA TTGTAGAACG CTACAACACC CTTGGCGGTG TTTGTCTGAA CGTCGGCTGT ATCCCTTCTA AAGCGCTGCT GCACGTAGCA AAAGTTATCG AAGAAGCCAA AGCGCTGGCT GAACACGGTA TCGTCTTCGG TGAGCCGAAA ACCGATATCG ACAAGATTCG TACCTGGAAA GAGAAAGTGA TCACGCAGCT GACCGGCGGT CTGGCGGGTA TGGCCAAAGG CCGTAAAGTG AAAGTGGTCA ACGGTCTGGG TAAATTCACC GGGGCGAACA CCCTGGAAGT GGAAGGCGAA AACGGCAAAA CCGTGATCAA CTTCGACAAC GCGATCATCG CGGCAGGTTC TCGTCCGATC CAATTACCGT TTATTCCGCA TGAAGACCCG CGCGTATGGG ATTCTACCGA CGCTCTGGAA CTGAAAGAAG TGCCGAAGCG TATGCTGGTC ATGGGCGGCG GTATCATCGG TCTGGAAATG GGTACCGTAT ACCACGCGCT GGGTTCAGAG ATTGACGTGG TTGAAATGTT CGACCAGGTT ATCCCGGCGG CTGATAAAGA CATCGTTAAA GTCTTCACCA AGCGCATCAG CAAGAAATTC AACCTGATGC TGGAAACCAA AGTGACTGCC GTTGAAGCGA AAGAAGACGG TATCTACGTT TCGATGGAAG GCAAAAAAGC CCCGGCTGAA GCGCAGCGTT ATGATGCGGT TCTGGTGGCG ATTGGTCGTG TGCCGAACGG TAAAAACCTC GACGCGGGCA AAGCTGGCGT GGAAGTTGAC GACCGTGGCT TTATCCGCGT GGACAAACAG CTGCGCACCA ACGTGCCGCA CATCTTCGCT ATCGGCGATA TCGTCGGTCA GCCGATGCTG GCGCATAAAG GCGTTCACGA AGGCCACGTT GCCGCTGAAG TTATCGCCGG GAAGAAACAC TACTTCGATC CGAAAGTTAT CCCGTCTATC GCGTACACCG AGCCAGAAGT GGCATGGGTT GGCCTGACCG AGAAAGAAGC GAAAGAAAAA GGCATCAGCT ATGAAACCGC CACCTTCCCG TGGGCAGCTT CTGGCCGTGC TATCGCTTCT GACTGTGCAG ACGGTATGAC CAAACTGATT TTCGACAAAG AATCTCACCG CGTGATCGGC GGGGCGATTG TCGGTACCAA CGGCGGCGAG CTGCTGGGTG AAATCGGTCT GGCGATCGAA ATGGGCTGTG ACGCGGAAGA CATCGCGCTG ACCATTCATG CGCACCCGAC TCTGCACGAG TCCGTCGGTC TGGCTGCTGA AGTGTTCGAA GGTAGTATTA CCGACCTGCC GAACCCGAAA GCGAAGAAGA AATAA
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Protein sequence | MSTEIKTQVV VLGAGPAGYS AAFRCADLGL ETVIVERYNT LGGVCLNVGC IPSKALLHVA KVIEEAKALA EHGIVFGEPK TDIDKIRTWK EKVITQLTGG LAGMAKGRKV KVVNGLGKFT GANTLEVEGE NGKTVINFDN AIIAAGSRPI QLPFIPHEDP RVWDSTDALE LKEVPKRMLV MGGGIIGLEM GTVYHALGSE IDVVEMFDQV IPAADKDIVK VFTKRISKKF NLMLETKVTA VEAKEDGIYV SMEGKKAPAE AQRYDAVLVA IGRVPNGKNL DAGKAGVEVD DRGFIRVDKQ LRTNVPHIFA IGDIVGQPML AHKGVHEGHV AAEVIAGKKH YFDPKVIPSI AYTEPEVAWV GLTEKEAKEK GISYETATFP WAASGRAIAS DCADGMTKLI FDKESHRVIG GAIVGTNGGE LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SVGLAAEVFE GSITDLPNPK AKKK
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