Gene SeHA_C0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0164 
Symbol 
ID6489419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp168580 
End bp169950 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content56% 
IMG OID642740446 
Productaromatic amino acid transporter 
Protein accessionYP_002044120 
Protein GI194449960 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.280272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTC AGCAGCACGG CGAGCAGCTC AAGCGCGGCC TGAAAAACCG CCATATTCAG 
CTTATCGCAT TGGGCGGCGC GATAGGGACA GGCTTGTTCC TGGGAAGCGC CTCCGTTATT
CAGTCGGCGG GGCCAGGAAT TATCCTGGGC TATGCGATTG CAGGCTTTAT TGCCTTTCTG
ATTATGCGCC AGCTGGGGGA GATGGTGGTT GAAGAACCGG TCGCCGGCTC TTTTAGCCAC
TTCGCCTATA AATACTGGGG CGGCTTTGCC GGATTCGCTT CCGGCTGGAA CTACTGGGTG
CTGTACGTAT TAGTTGCCAT GGCGGAACTG ACCGCAGTGG GTAAATATAT CCAGTTCTGG
TATCCGGAGA TCCCCACCTG GGCTTCTGCG GCAGCCTTCT TTGTGATTAT CAACGCCATC
AACCTGACCA ACGTTAAAGT GTTCGGTGAG ATGGAGTTTT GGTTCGCCAT TATTAAAGTG
ATCGCCGTCA TCGCTATGAT TCTGTTCGGC GCGTGGTTAC TCTTCAGCGA TACCGCTGGT
CCGCAGGCCA CCGTGCGCAA CCTGTGGGAA CAGGGCGGCT TTCTGCCGCA TGGCTGGACC
GGGCTGGTGA TGATGATGGC CATTATTATG TTTTCTTTCG GCGGACTGGA GCTGGTAGGG
ATCACCGCCG CTGAAGCCGA TAACCCGGAA CAGAGCATCC CCAAAGCCAC TAATCAGGTT
ATCTATCGCA TCCTGATTTT TTATATCGGC TCGCTGGCGG TTCTGCTTTC GCTGCTGCCA
TGGACGCGCG TCACCGCCGA TACCAGCCCG TTTGTCCTTA TCTTCCATGA GCTGGGCGAT
ACGTTTGTCG CCAATGCGCT GAATATCGTG GTTCTCACCG CCGCGCTATC GGTTTATAAC
AGCTGCGTTT ACTGCAACAG CCGTATGCTG TTCGGTCTGG CCCAGCAGGG AAATGCGCCG
AAAGCGCTGC TGAACGTCGA CAAACGCGGC GTGCCGGTGA GCTCCATTTT GGTTTCCGCC
GTCGTGACTG CGTTGTGCGT GCTGCTCAAC TACCTGGCCC CAGAGTCCGC ATTCGGACTG
CTGATGGCGC TGGTGGTCTC CGCGCTGGTT ATTAACTGGG CGATGATTAG CCTTGCCCAT
ATGATGTTCC GTCGCGCGAA ACAGCAGCAG GGCGTGAAAA CCCGCTTCCC GGCCCTGTTT
TATCCGTTCG GCAACGTTCT CTGCCTGCTG TTTATGGCGG CGGTATTGAT CATTATGCTG
ATGACGCCAG GTATGGCGAT CTCCGTGTGG CTGATTCCGG TATGGCTGCT TATCCTGGGC
GTCGGCTATC TGTGTAAAGA AAAAACGGCA AAAACGGTGA AAGCCCACTG A
 
Protein sequence
MDSQQHGEQL KRGLKNRHIQ LIALGGAIGT GLFLGSASVI QSAGPGIILG YAIAGFIAFL 
IMRQLGEMVV EEPVAGSFSH FAYKYWGGFA GFASGWNYWV LYVLVAMAEL TAVGKYIQFW
YPEIPTWASA AAFFVIINAI NLTNVKVFGE MEFWFAIIKV IAVIAMILFG AWLLFSDTAG
PQATVRNLWE QGGFLPHGWT GLVMMMAIIM FSFGGLELVG ITAAEADNPE QSIPKATNQV
IYRILIFYIG SLAVLLSLLP WTRVTADTSP FVLIFHELGD TFVANALNIV VLTAALSVYN
SCVYCNSRML FGLAQQGNAP KALLNVDKRG VPVSSILVSA VVTALCVLLN YLAPESAFGL
LMALVVSALV INWAMISLAH MMFRRAKQQQ GVKTRFPALF YPFGNVLCLL FMAAVLIIML
MTPGMAISVW LIPVWLLILG VGYLCKEKTA KTVKAH