Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0158 |
Symbol | |
ID | 6491179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | - |
Start bp | 162914 |
End bp | 163351 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642740440 |
Product | putative major pilin subunit |
Protein accession | YP_002044114 |
Protein GI | 194448638 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.320147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAC AACGCGGTTT CACGCTTATC GAACTGATGG TCGTTATTGG CATCATCGCC ATTTTAAGCG CCATTGGCAT TCCGGCTTAC CAGAACTATC TGCGTAAAGC GGCACTGACG GATATGTTGC AAACGTTTGT CCCCTACCGT ACTGCCGTCG AACTCTGCGC TCTGGAACAT GGTGGGACGA GCACATGCGA TGCGGGCGTC AACGGTATCC CCTCGCCCGT CATCACCCGT TATGTTTCGG GCATGAGCGT GGAAAAAGGC GTCATCACGC TTACCGGCCA GGAGAGTCTG AGCGGGCTTA GCGTCATCAT GACGCCCGCC TGGGACAATG CTAACGGCAT TACCGGCTGG ACGCGTAACT GCAATATTCA AAGCGACAGC GCGTTACAAC AGGCTTGTGA AGATGTCTTC CGTTTTGACA CCAACTAA
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Protein sequence | MEKQRGFTLI ELMVVIGIIA ILSAIGIPAY QNYLRKAALT DMLQTFVPYR TAVELCALEH GGTSTCDAGV NGIPSPVITR YVSGMSVEKG VITLTGQESL SGLSVIMTPA WDNANGITGW TRNCNIQSDS ALQQACEDVF RFDTN
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