Gene SeHA_C0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0157 
Symbol 
ID6488283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp161519 
End bp162904 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content55% 
IMG OID642740439 
Producthypothetical protein 
Protein accessionYP_002044113 
Protein GI194451855 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.208845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACG CTCAGCTCAA CACCTTGTGT CAACGTCATC AGGCTGTACT GATCAATAGC 
GCCAGCAACA GTATCACTGT TGCGGTGGTC GACGCGCCCT CTCATGCGTT ACTGGACGCT
CTGCATTTCG CCACGCAAAA ACAGATTGAT ATTGTGTGCT GGACTCGCCA GCAAATGGAA
AATCATCGGC ATAAGCCGGA TCAGGCACCC TCGGCAAACG CCGCGAAAGG CGGAGAAACC
GCGGCCCAGC TTCTCAATCA GACATTACGC TCGGCGATGG CGAAACGCGC TTCTGATATC
CATCTCGAAC CAGGCGCCAG CCGCTACCGA ATAAGACTCC GCATCGACGG CGTTCTTCAT
ATTCTGCAGG ACATCGCCAA AGAGACGGGG CTTGCGCTGA CGGCCAGATT GAAAGTCCTG
GGAAATTTGG ACATCGCTGA ACATCGACTG CCGCAGGACG GGCAATTTAC CGTTGACCTG
GCGGGCGACA GCATCTCTTT TCGTATCGCC ACGCTTCCCT GTAAAGAAGG CGAAAAAGTC
GTCTTACGGT TGTTGCATCA GGTTGAACAA ACGCTGGATC TGGACACGCT GGGCATGTAC
GGGGCACAAC TTACCGCTTT TAGACAAGCC CTACAGCAAC CTCAGGGGCT GGTACTGGTG
ACTGGCCCCA CCGGTAGCGG AAAAACAGTC ACGCTATACA GCGCGCTACA AACCCGGAAT
ACGCCGGGTA TCAACCTCTG TAGCGTTGAG GATCCGATAG AAATTCCACT GGATGGGATT
AACCAGACGC AGATCCATCC CCGCGCCGGG CTCACCTTTC AAAATGTGCT GCGCGCGCTT
TTACGCCAGG ACCCTGACAT CATCATGGTA GGTGAAATTC GTGACGGCGA CACCGCAGAA
ATCGCCATTA AGGCGGCACA AACGGGCCAT CTGGTACTTT CAACGCTCCA TACGAACTCC
ACCAGCGAAA CCCTGATACG TTTGCAGCAA ATGGGCGTAG CACGCTGGAT GATCTCATCG
GCGCTTACGC TGGTAGTAGC GCAACGCCTG GTAAGGAAGC TTTGCCCGCA CTGCAAACAG
CGTCTGAGCG ATCCCGTGGT GCTATCGCCC AATCTTTGGC CCAGCGCGCT ACCGCGCTGG
CAGGCAAGCG GCTGTCAGCA TTGCTACCAC GGCTTTTATG GCCGAACCGC GTTATTCGAA
GTGTTAACCG TTACCCCGGC ATTACGTCAG TTAATTGCGA GCGGCGCATC GGCGCAAGCA
CTGGAAGCCC ACCTCCAACA GACCGGTACA GGGACGCTTT TTGAAAATGG CTGTCGCGCC
GTTGAGCAAG GCATGACGTC CTTTGAAGAG ATACTGCGCG TTCTGGGAAT GCCCCATGAG
CGTTAA
 
Protein sequence
MKDAQLNTLC QRHQAVLINS ASNSITVAVV DAPSHALLDA LHFATQKQID IVCWTRQQME 
NHRHKPDQAP SANAAKGGET AAQLLNQTLR SAMAKRASDI HLEPGASRYR IRLRIDGVLH
ILQDIAKETG LALTARLKVL GNLDIAEHRL PQDGQFTVDL AGDSISFRIA TLPCKEGEKV
VLRLLHQVEQ TLDLDTLGMY GAQLTAFRQA LQQPQGLVLV TGPTGSGKTV TLYSALQTRN
TPGINLCSVE DPIEIPLDGI NQTQIHPRAG LTFQNVLRAL LRQDPDIIMV GEIRDGDTAE
IAIKAAQTGH LVLSTLHTNS TSETLIRLQQ MGVARWMISS ALTLVVAQRL VRKLCPHCKQ
RLSDPVVLSP NLWPSALPRW QASGCQHCYH GFYGRTALFE VLTVTPALRQ LIASGASAQA
LEAHLQQTGT GTLFENGCRA VEQGMTSFEE ILRVLGMPHE R