| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0124 |
|---|
| Symbol | leuA |
|---|
| ID | 6491709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 127366 |
|---|
| End bp | 128937 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642740409 |
|---|
| Product | 2-isopropylmalate synthase |
|---|
| Protein accession | YP_002044083 |
|---|
| Protein GI | 194447773 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.041588 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGC AAGTCATTAT TTTTGATACG ACCTTACGCG ACGGCGAACA AGCGTTACAG
GCCAGCCTGA GCGCGAAAGA GAAGCTGCAG ATTGCCCTGG CCCTTGAGCG CATGGGTGTT
GATGTCATGG AAGTAGGCTT CCCGGTCTCT TCTCCGGGTG ATTTTGAATC CGTCCAAACC
ATCGCCCGCA CCATTAAAAA CAGCCGCGTT TGCGCCCTGG CGCGTTGTGT AGAAAAAGAC
ATCGACGTCG CGGCACAGGC GCTGAAGGTC GCCGACGCGT TTCGCATCCA TACTTTTATC
GCCACCTCGC CAATGCACAT CGCCACCAAG CTGCGCAGCA CGCTGGATGA GGTTATCGAA
CGCGCGGTAT ACATGGTTAA GCGGGCGCGT AATTACACTG ATGACGTAGA GTTCTCCTGC
GAAGATGCTG GCCGGACGCC TGTTGACGAT CTGGCGCGCG TGGTGGAAGC CGCTATAAAC
GCCGGCGCGA GAACCATTAA TATTCCCGAT ACCGTGGGCT ATACCATGCC GTTTGAGTTT
GCGGGAATCA TTTCCGGCCT GTATGAACGT GTCCCCAATA TCGACAAAGC TATCATCTCC
GTTCATACCC ACGACGATTT AGGGATAGCA GTAGGCAACT CGCTGGCGGC AGTACATGCG
GGCGCGCGTC AGGTTGAAGG CGCGATGAAC GGTATCGGAG AACGTGCCGG TAACTGCGCA
CTGGAAGAAG TGATCATGGC GATTAAAGTG CGCAAAGACA TCATGAACGT ACACACCAAC
ATCAATCACC ACGAAATCTG GCGCACCAGC CAGACCGTCA GCCAGATCTG TAACATGCCG
ATCCCAGCCA ACAAAGCGAT TGTCGGCAGC GGCGCTTTCG CCCACTCTTC CGGCATCCAC
CAGGATGGCG TCCTCAAGAA CCGCGAAAAC TATGAAATCA TGACGCCAGA GTCCATCGGT
CTGAACCAGA TACAGCTGAA CCTGACCTCC CGCTCTGGCC GTGCCGCCGT GAAACATCGC
ATGGAAGAGA TGGGTTACAA GGACACAGAC TACAACATGG ACCACCTGTA CGACGCGTTC
CTGAAGCTGG CGGACAAAAA AGGCCAGGTG TTCGACTATG ACCTGGAAGC GCTGGCGTTT
ATTAATAAAC AGCAAGAAGA ACCAGAGCAT TTCCGTCTGG ATTACTTCAG CGTGCAGTCC
GGCTCCAGCG ATATCGCCAC CGCTTCCGTG AAGCTGGCCT GTGGTGAAGA GATCAAGGCC
GAAGCGGCGA ACGGCAACGG TCCGGTCGAC GCCATCTATC AGGCGATTAA CCGCATCACT
GGCTACGACG TTGAGTTGGT TAAATACGAC CTGAACGCCA AAGGCCAGGG CAAAGACGCG
CTGGGTCAGG TCGATATCGT CGTGAACCAT CATGGTCGCC GCTTCCACGG CGTCGGGCTG
GCGACGGATA TCGTCGAATC CTCCGCCAAA GCGATGGTGC ACGTACTGAA CAATATCTGG
CGCGCCGCCG AAGTTGAAAA AGAATTGCAA CGCAAAGCTC AAAATAAAGA GAACAACAAG
GAAACCGTGT AA
|
|---|
| Protein sequence | MSQQVIIFDT TLRDGEQALQ ASLSAKEKLQ IALALERMGV DVMEVGFPVS SPGDFESVQT
IARTIKNSRV CALARCVEKD IDVAAQALKV ADAFRIHTFI ATSPMHIATK LRSTLDEVIE
RAVYMVKRAR NYTDDVEFSC EDAGRTPVDD LARVVEAAIN AGARTINIPD TVGYTMPFEF
AGIISGLYER VPNIDKAIIS VHTHDDLGIA VGNSLAAVHA GARQVEGAMN GIGERAGNCA
LEEVIMAIKV RKDIMNVHTN INHHEIWRTS QTVSQICNMP IPANKAIVGS GAFAHSSGIH
QDGVLKNREN YEIMTPESIG LNQIQLNLTS RSGRAAVKHR MEEMGYKDTD YNMDHLYDAF
LKLADKKGQV FDYDLEALAF INKQQEEPEH FRLDYFSVQS GSSDIATASV KLACGEEIKA
EAANGNGPVD AIYQAINRIT GYDVELVKYD LNAKGQGKDA LGQVDIVVNH HGRRFHGVGL
ATDIVESSAK AMVHVLNNIW RAAEVEKELQ RKAQNKENNK ETV
|
|---|
| |