Gene SeHA_C0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0123 
SymbolleuB 
ID6489551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp126275 
End bp127366 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content56% 
IMG OID642740408 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_002044082 
Protein GI194449448 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.0556005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAGA ACTATCATAT TGCCGTACTG CCGGGCGACG GTATCGGCCC GGAAGTCATG 
GCGCAAGCCC TGAAAGTTAT GGATGCGGTA CGCAGCCGTT TTGATATGCG TATAACCACC
AGCCACTATG ACGTCGGCGG TATTGCTATC GACAATCATG GTCATCCACT GCCGAAAGCC
ACCGTTGAAG GGTGCGAGCA GGCGGATGCC ATTCTGTTTG GCTCCGTCGG CGGCCCGAAA
TGGGAAAATT TGCCCCCGGA AAGCCAGCCG GAGCGCGGCG CCCTGCTGCC GCTGCGCAAA
CATTTCAAAT TATTCAGTAA CCTGCGTCCG GCGAAACTGT ATCAGGGACT GGAAGCATTT
TGCCCGTTGC GCGCCGATAT CGCCGCTAAC GGTTTCGATA TCCTGTGCGT GCGCGAGCTG
ACCGGCGGGA TCTATTTCGG ACAGCCAAAA GGCCGTGAAG GCAGCGGTCA GTACGAAAAA
GCCTTTGATA CCGAAGTTTA TCACCGCTTT GAGATCGAGC GCATTGCCCG TATCGCCTTT
GAATCGGCGC GTAAACGCCG CCGTAAAGTC ACCTCTATTG ATAAAGCCAA CGTACTGCAA
AGCTCTATCC TGTGGCGTGA AATCGTCAAT GATGTCGCGA AAACGTATCC CGATGTGGAA
CTCGCGCACA TGTATATCGA TAACGCCACC ATGCAGTTGA TTAAAGACCC GTCGCAGTTT
GACGTACTGC TGTGCTCTAA CCTGTTCGGC GACATTCTGT CCGACGAATG CGCCATGATC
ACCGGCTCAA TGGGGATGTT GCCCTCCGCC AGCCTGAACG AGCAAGGGTT TGGCCTGTAT
GAACCGGCTG GCGGCTCCGC GCCGGATATC GCCGGGAAAA ATATCGCCAA CCCAATTGCG
CAGATCCTGT CACTGGCGCT GCTGCTGCGC TACAGCCTGG ATGCCAACGA TGCGGCAACG
GCCATTGAAC AGGCGATCAA TCGCGCATTA GAAGAGGGCG TTCGCACCGG CGATTTAGCC
AGGGGCGCTG CCGCAGTCAG TACCGATGAG ATGGGCGATA TTATCGCCCG CTATGTCGCA
GAAGGGGTGT AA
 
Protein sequence
MSKNYHIAVL PGDGIGPEVM AQALKVMDAV RSRFDMRITT SHYDVGGIAI DNHGHPLPKA 
TVEGCEQADA ILFGSVGGPK WENLPPESQP ERGALLPLRK HFKLFSNLRP AKLYQGLEAF
CPLRADIAAN GFDILCVREL TGGIYFGQPK GREGSGQYEK AFDTEVYHRF EIERIARIAF
ESARKRRRKV TSIDKANVLQ SSILWREIVN DVAKTYPDVE LAHMYIDNAT MQLIKDPSQF
DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKNIANPIA
QILSLALLLR YSLDANDAAT AIEQAINRAL EEGVRTGDLA RGAAAVSTDE MGDIIARYVA
EGV