Gene SeHA_C0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0108 
SymbolaraA 
ID6488406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp113276 
End bp114778 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content56% 
IMG OID642740396 
ProductL-arabinose isomerase 
Protein accessionYP_002044070 
Protein GI194450274 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2160] L-arabinose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATTT TTGATAATTA TGAAGTATGG TTTGTGATTG GCAGCCAGCA TTTGTATGGC 
GCAGAAACCC TGCGTCAGGT CACCCAACAT GCCGAGCATG TGGTCAACGC GCTGAATACC
GAAGCCAAAC TGCCATGTAA ACTGGTATTA AAACCGCTGG GCACCTCGCC GGATGAGATT
ACCGCCATTT GTCGTGACGC CAATTATGAC GATCGCTGCG CAGGGCTGGT GGTCTGGCTG
CACACCTTCT CCCCGGCCAA AATGTGGATC AACGGGCTGA GTATCCTTAA CAAACCACTA
CTGCAATTCC ATACCCAATT TAACGCCGCC CTGCCGTGGG ACAGCATTGA TATGGACTTT
ATGAACCTGA ACCAGACTGC GCACGGCGGT CGTGAGTTCG GTTTTATCGG CGCGCGGATG
CGCCAGCAGC ACGCGGTCGT CACCGGTCAC TGGCAGGATA AAGAGGCCCA TACGCGTATC
GGTGCCTGGA TGCGCCAGGC GGTCTCTAAA CAGGATACCC GCCAGCTAAA AGTCTGCCGC
TTCGGCGACA ATATGCGTGA AGTCGCAGTG ACTGACGGTG ATAAAGTGGC CGCGCAAATC
AAATTTGGCT TTTCGGTCAA TACCTGGGCG GTCGGCGATC TGGTGCAGGT GGTGAATTCT
ATCGGCGACG GCGATATCAA CGCTCTGATT GACGAGTATG AAAGCAGCTA TACCCTGACG
CCCGCCACCC AAATCCACGG CGATAAACGC CAGAACGTGC GGGAGGCGGC GCGTATTGAA
CTCGGTATGA AGCGTTTCCT GGAACAGGGC GGCTTCCACG CATTCACTAC TACCTTTGAA
GATTTACACG GTCTGAAACA GCTTCCGGGT CTGGCCGTAC AGCGTCTGAT GCAGCAAGGC
TACGGCTTTG CGGGCGAAGG CGACTGGAAA ACCGCCGCTC TGCTTCGCAT TATGAAAGTG
ATGTCAACCG GTCTGCAGGG CGGCACCTCA TTTATGGAGG ATTACACCTA CCACTTCGAG
AAAGGCAACG ATCTGGTGCT CGGCTCGCAC ATGCTGGAAG TGTGTCCGTC CATCGCGGTG
GAAGAGAAAC CGATCCTCGA CGTCCAGCAC CTCGGCATTG GCGGCAAGGA AGATCCGGCG
CGTTTGATTT TCAATACCCA AACCGGCCCG GCGATCGTCG CCAGCCTGAT CGACCTCGGC
GATCGTTATC GCCTGCTGGT CAACTGCATT GACACCGTAA AAACGCCGCA CTCCCTGCCG
AAACTGCCGG TGGCTAACGC GCTGTGGAAG GCGCAGCCGG ATCTGCCGAC CGCCTCCGAA
GCGTGGATTC TGGCTGGCGG CGCGCACCAT ACCGTCTTCA GCCACGCGCT GGATCTGAAC
GATATGCGCC AGTTTGCAGA AATACACGAT ATCGAAATCG CGGTGATTGA TAACGATACC
CATCTGCCGG CCTTTAAGGA CGCGCTGCGC TGGAACGAGG TGTATTACGG GTTCAAACGT
TAA
 
Protein sequence
MTIFDNYEVW FVIGSQHLYG AETLRQVTQH AEHVVNALNT EAKLPCKLVL KPLGTSPDEI 
TAICRDANYD DRCAGLVVWL HTFSPAKMWI NGLSILNKPL LQFHTQFNAA LPWDSIDMDF
MNLNQTAHGG REFGFIGARM RQQHAVVTGH WQDKEAHTRI GAWMRQAVSK QDTRQLKVCR
FGDNMREVAV TDGDKVAAQI KFGFSVNTWA VGDLVQVVNS IGDGDINALI DEYESSYTLT
PATQIHGDKR QNVREAARIE LGMKRFLEQG GFHAFTTTFE DLHGLKQLPG LAVQRLMQQG
YGFAGEGDWK TAALLRIMKV MSTGLQGGTS FMEDYTYHFE KGNDLVLGSH MLEVCPSIAV
EEKPILDVQH LGIGGKEDPA RLIFNTQTGP AIVASLIDLG DRYRLLVNCI DTVKTPHSLP
KLPVANALWK AQPDLPTASE AWILAGGAHH TVFSHALDLN DMRQFAEIHD IEIAVIDNDT
HLPAFKDALR WNEVYYGFKR