Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0064 |
Symbol | citE |
ID | 6488758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 65457 |
End bp | 66326 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642740353 |
Product | citrate (pro-3S)-lyase subunit beta |
Protein accession | YP_002044027 |
Protein GI | 194449708 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | [TIGR01588] citrate lyase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACCAC GTCGCAGTAT GTTGTTTATC CCCGGCGCAA ATGCGGCCAT GTTGAGTACC TCGTTTGTCT ATGGTGCGGA CGCGGTGATG TTCGACTTAG AAGACGCCGT AGCGTTACGT GAGAAAGATA CCGCCCGTCT TTTAGTCCAT CACGCGCTTC AACATCCGTT CTATCAGGAT GTTGAAAAAG TGGTGCGCAT TAATCCACTG AACACGCCGT TTGGTCTGGC CGATCTTGAA GCCGTCGTGC GTGGTGGCGC GGATATCGTG CGTCTGCCGA AAACCGACAG CAAAAACGAT GTGCTGGAGC TGGAAGCGCA GGTCGAACGG ATCGAACGTG AATGTGGACG CGCGGTCGGC AGTACCAGGC TGATGGCGGC GATCGAATCA GCGAAAGGCG TGGTCAATGC CGTCGACATC GCCACCTCCA GCCCGCGCAT GGTGGCAATT GCGCTGGCGG CATTTGATTA CGTGATGGAT ATGGGCACCT GCCGGGGCGA TGGCACCGAG CTGTTCTACG CCCGCTGCGC AGTGCTGCAT GCGGCGCGCG TTGCGGGTAT TGCCGCCTAT GATGTCGTTT GGTCGGATAT CAATAATGAA GAAGGCTTCC TGAAGGAAGT GCAGTTGGCG AAAGGGCTTG GTTTTAATGG TAAGTCCTTA GTGAACCCAC GTCAGATTGA GCTGTTACAT CAGGCTTATT CTCCGACACG TAAAGAAGTT GAGCATGCGT ATGAGGTGAT TGCCGCCGCT GAAGAGGCTG AGTCTCGCGG TCTGGGCGTC GTTTCACTCA ACGGCAAAAT GATTGACGGC CCGATTATCG ACCACGCGCG CAAAGTGGTG GCGCTGTCGG CTTCCGGTAT TCGTGATTAA
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Protein sequence | MRPRRSMLFI PGANAAMLST SFVYGADAVM FDLEDAVALR EKDTARLLVH HALQHPFYQD VEKVVRINPL NTPFGLADLE AVVRGGADIV RLPKTDSKND VLELEAQVER IERECGRAVG STRLMAAIES AKGVVNAVDI ATSSPRMVAI ALAAFDYVMD MGTCRGDGTE LFYARCAVLH AARVAGIAAY DVVWSDINNE EGFLKEVQLA KGLGFNGKSL VNPRQIELLH QAYSPTRKEV EHAYEVIAAA EEAESRGLGV VSLNGKMIDG PIIDHARKVV ALSASGIRD
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