| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeHA_C0058 |
|---|
| Symbol | |
|---|
| ID | 6488139 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011083 |
|---|
| Strand | - |
|---|
| Start bp | 59005 |
|---|
| End bp | 60306 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642740347 |
|---|
| Product | oxaloacetate decarboxylase subunit beta |
|---|
| Protein accession | YP_002044021 |
|---|
| Protein GI | 194448149 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
|---|
| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0452958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGTC TGAACGCCCT GCTTCAGGGC ATGGGGCTGA TGCACCTTGG CGCAGGCCAG
GCCATCATGC TGCTGGTGAG CCTGCTGCTG CTGTGGCTGG CGATAGCGAA GAAGTTCGAG
CCGTTGTTGC TGCTGCCGAT TGGCTTCGGC GGGCTGCTCT CCAACATCCC GGAAGCGGGC
ATGGCGCTGA CCGCGCTGGA GAGCCTGCTG GCGCATCACG ACGCCGGGCA GCTGGCGGTG
ATTGCCGCGA AGCTGAACTG CGCGCCGGAC GTGCACGCCA TCAAGGAAGC ATTAGCGCTG
GCGCTGCCGT CGGTGCAGGG CCAGATGGAA AATCTGGCGG TGGACATGGG CTACACGCCG
GGGGTGCTGG CGCTGTTCTA TAAAGTGGCG ATTGGCTCCG GCGTCGCGCC GCTGGTCATC
TTTATGGGCG TGGGCGCGAT GACCGACTTC GGCCCGCTGC TGGCCAACCC GCGCACCCTG
CTGCTCGGCG CGGCGGCGCA GTTCGGTATC TTCGCCACCG TGCTGGGGGC GCTGACGCTG
AACTACTTCG GGATAATCAG CTTCACCCTG CCGCAGGCGG CGGCCATCGG CATTATCGGC
GGCGCGGACG GCCCGACGGC GATTTATCTG TCGGGCAAGC TGGCCCCGGA GCTGCTGGGG
GCCATCGCGG TGGCGGCGTA CTCGTATATG GCGCTGGTGC CGTTAATCCA GCCGCCGATT
ATGCGCGCGC TGACCACGGA GACGGAGCGG AAAATCCGCA TGGTGCAGCT GCGCACGGTG
AGTAAGCGGG AAAAAATCCT CTTCCCGGTA GTGCTGTTAC TACTGGTGGC GCTGCTGCTG
CCGGACGCCG CGCCGCTGCT GGGGATGTTC TGCTTTGGCA ATCTGATGCG TGAAAGCGGC
GTGGTGGAGC GTCTGAGCGA CACGGTGCAG AACGGGCTGA TTAATATCGT CACCATCTTC
CTCGGGCTGT CGGTGGGCGC GAAGCTGGTG GCGGACAAGT TCCTGCAACC GCAGACGCTG
GGCATTCTGC TGCTGGGGGT GGTTGCGTTC GGTATCGGGA CGGCGGCCGG GGTGCTGATG
GCGAAGCTGC TGAACCTGTG CAGTAAGAAC AAAATCAACC CGCTTATCGG TTCGGCGGGG
GTCTCGGCGG TGCCGATGGC GGCCCGCGTA TCGAACAAAG TGGGGCTGGA ATCAGACCCG
CAGAACTTCC TGCTGATGCA CGCGATGGGC CCGAACGTGG CGGGGGTAAT TGGCTCGGCC
ATTGCCGCGG GCGTGATGCT GAAGTACGTG CTGGCGATGT AA
|
|---|
| Protein sequence | MESLNALLQG MGLMHLGAGQ AIMLLVSLLL LWLAIAKKFE PLLLLPIGFG GLLSNIPEAG
MALTALESLL AHHDAGQLAV IAAKLNCAPD VHAIKEALAL ALPSVQGQME NLAVDMGYTP
GVLALFYKVA IGSGVAPLVI FMGVGAMTDF GPLLANPRTL LLGAAAQFGI FATVLGALTL
NYFGIISFTL PQAAAIGIIG GADGPTAIYL SGKLAPELLG AIAVAAYSYM ALVPLIQPPI
MRALTTETER KIRMVQLRTV SKREKILFPV VLLLLVALLL PDAAPLLGMF CFGNLMRESG
VVERLSDTVQ NGLINIVTIF LGLSVGAKLV ADKFLQPQTL GILLLGVVAF GIGTAAGVLM
AKLLNLCSKN KINPLIGSAG VSAVPMAARV SNKVGLESDP QNFLLMHAMG PNVAGVIGSA
IAAGVMLKYV LAM
|
|---|
| |